Guide to the Human Genome
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Name: RAP1GAP Sequence: fasta or formatted (681aa) NCBI GI: 224809573
Description:

RAP1 GTPase activating protein isoform b

Referenced in:

Ras

Other entries for this name:
alt prot [727aa] RAP1 GTPase activating protein isoform a
alt prot [663aa] RAP1 GTPase activating protein isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         38           2
 C cysteine            1.3          9           1
 D aspartate           4.6         31           2
 E glutamate           8.8         60           3
 F phenylalanine       5.4         37           2
 G glycine             8.2         56           4
 H histidine           2.6         18           1
 I isoleucine          4.6         31           1
 K lysine              6.0         41           2
 L leucine             7.5         51           3
 M methionine          1.9         13           2
 N asparagine          3.2         22           2
 P proline             6.8         46           3
 Q glutamine           4.1         28           2
 R arginine            4.7         32           2
 S serine              9.8         67           4
 T threonine           5.6         38           2
 V valine              6.2         42           3
 W tryptophan          0.3          2           1
 Y tyrosine            2.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAP1 GTPase activating protein isoform b 
RAP1GAP               0.944   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.944   RAP1 GTPase activating protein isoform a 
GARNL4                0.451   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.438   GTPase activating Rap/RanGAP domain-like 4 isoform ...
SIPA1L3               0.148   signal-induced proliferation-associated 1 like 3 [Ho...
SIPA1L1               0.146   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L2               0.145   signal-induced proliferation-associated 1 like 2 [H...
GARNL3                0.138   GTPase activating Rap/RanGAP domain-like 3 
SIPA1                 0.137   signal-induced proliferation-associated protein 1 [...
SIPA1                 0.137   signal-induced proliferation-associated protein 1 [...
C20orf74              0.042   akt substrate AS250 
GARNL1                0.039   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.039   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
TSC2                  0.036   tuberous sclerosis 2 isoform 4 
TSC2                  0.036   tuberous sclerosis 2 isoform 1 
TSC2                  0.036   tuberous sclerosis 2 isoform 5 
ASXL1                 0.013   additional sex combs like 1 
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
BSN                   0.011   bassoon protein 
CYLC1                 0.011   cylicin, basic protein of sperm head cytoskeleton 1...
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 1...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.010   voltage-dependent calcium channel alpha 1G subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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