Guide to the Human Genome
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Name: C20orf74 Sequence: fasta or formatted (1873aa) NCBI GI: 118600961
Description:

akt substrate AS250

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8        109           3
 C cysteine            2.3         43           2
 D aspartate           4.9         91           2
 E glutamate           7.2        134           3
 F phenylalanine       4.2         79           2
 G glycine             4.9         92           3
 H histidine           2.4         45           1
 I isoleucine          5.4        102           3
 K lysine              5.3         99           2
 L leucine            11.4        213           3
 M methionine          1.9         36           2
 N asparagine          4.2         78           2
 P proline             5.2         98           2
 Q glutamine           4.6         86           4
 R arginine            4.8         89           2
 S serine              8.9        166           4
 T threonine           5.7        107           3
 V valine              6.8        127           2
 W tryptophan          1.4         26           1
 Y tyrosine            2.8         53           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   akt substrate AS250 
GARNL1                0.301   GTPase activating Rap/RanGAP domain-like 1 isoform 2...
GARNL1                0.301   GTPase activating Rap/RanGAP domain-like 1 isoform 1...
TSC2                  0.020   tuberous sclerosis 2 isoform 4 
TSC2                  0.020   tuberous sclerosis 2 isoform 1 
TSC2                  0.020   tuberous sclerosis 2 isoform 5 
RAP1GAP               0.015   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.015   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.015   RAP1 GTPase activating protein isoform b 
GARNL3                0.014   GTPase activating Rap/RanGAP domain-like 3 
GARNL4                0.014   GTPase activating Rap/RanGAP domain-like 4 isoform ...
GARNL4                0.014   GTPase activating Rap/RanGAP domain-like 4 isoform ...
SIPA1L3               0.013   signal-induced proliferation-associated 1 like 3 [Ho...
SIPA1L1               0.012   signal-induced proliferation-associated 1 like 1 [Hom...
SIPA1L2               0.012   signal-induced proliferation-associated 1 like 2 [H...
SIPA1                 0.010   signal-induced proliferation-associated protein 1 [...
SIPA1                 0.010   signal-induced proliferation-associated protein 1 [...
KIAA1219              0.010   hypothetical protein LOC57148 
RB1                   0.003   retinoblastoma 1 
KIAA0368              0.003   KIAA0368 protein 
TXLNA                 0.002   taxilin 
CTR9                  0.002   SH2 domain binding protein 1 
CEP350                0.002   centrosome-associated protein 350 
NPAT                  0.002   nuclear protein,  ataxia-telangiectasia locus [Homo...
PLEKHM1               0.002   pleckstrin homology domain containing, family M (wit...
DSPP                  0.002   dentin sialophosphoprotein preproprotein 
C4orf8                0.002   hypothetical protein LOC8603 
PNN                   0.002   pinin, desmosome associated protein 
SRRM2                 0.002   splicing coactivator subunit SRm300 
SAMD14                0.002   sterile alpha motif domain containing 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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