SYNM 967

Name: SYNM	Sequence: fasta or formatted (1565aa)		NCBI GI: 112382237
Description: desmuslin isoform A		Referenced in: Cytoskeleton
Other entries for this name: alt prot [1253aa] desmuslin isoform B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 131 2 C cysteine 0.4 6 1 D aspartate 5.0 79 2 E glutamate 12.6 197 4 F phenylalanine 2.2 34 1 G glycine 8.2 129 3 H histidine 2.2 34 1 I isoleucine 2.9 46 2 K lysine 4.3 68 2 L leucine 7.7 120 3 M methionine 1.3 20 1 N asparagine 1.6 25 1 P proline 4.3 68 3 Q glutamine 5.4 84 2 R arginine 8.6 134 3 S serine 9.5 148 3 T threonine 5.8 91 2 V valine 7.0 109 2 W tryptophan 1.0 15 1 Y tyrosine 1.7 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 desmuslin isoform A SYNM 0.731 desmuslin isoform B VIM 0.042 vimentin GFAP 0.038 glial fibrillary acidic protein isoform 2 GFAP 0.038 glial fibrillary acidic protein isoform 1 PRPH 0.038 peripherin NES 0.036 nestin DES 0.035 desmin INA 0.035 internexin neuronal intermediate filament protein, a... NEFL 0.035 neurofilament, light polypeptide 68kDa NEFH 0.034 neurofilament, heavy polypeptide 200kDa NEFM 0.029 neurofilament, medium polypeptide 150kDa isoform 1 ... KRT17 0.025 keratin 17 KRT33B 0.024 type I hair keratin 3B KRT33A 0.023 keratin 33A KRT16 0.023 keratin 16 KRT35 0.023 keratin 35 LMNB2 0.023 lamin B2 KRT31 0.023 keratin 31 KRT36 0.022 keratin 36 KRT8 0.022 keratin 8 KRT14 0.022 keratin 14 LMNA 0.022 lamin A/C isoform 3 LMNA 0.022 lamin A/C isoform 2 LMNA 0.022 lamin A/C isoform 1 precursor KRT34 0.021 keratin 34 KRT10 0.021 keratin 10 KRT15 0.020 keratin 15 KRT19 0.020 keratin 19 LMNB1 0.020 lamin B1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.