GFAP 28714

Name: GFAP	Sequence: fasta or formatted (432aa)		NCBI GI: 4503979
Description: glial fibrillary acidic protein isoform 1		Referenced in: Cytoskeleton
Other entries for this name: alt prot [431aa] glial fibrillary acidic protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 47 3 C cysteine 0.2 1 1 D aspartate 4.9 21 1 E glutamate 13.9 60 3 F phenylalanine 1.6 7 1 G glycine 3.0 13 2 H histidine 1.9 8 1 I isoleucine 3.0 13 1 K lysine 4.9 21 1 L leucine 13.0 56 2 M methionine 2.8 12 2 N asparagine 3.9 17 2 P proline 2.1 9 3 Q glutamine 6.0 26 2 R arginine 10.9 47 3 S serine 5.3 23 2 T threonine 4.6 20 1 V valine 4.6 20 2 W tryptophan 0.2 1 1 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glial fibrillary acidic protein isoform 1 GFAP 0.901 glial fibrillary acidic protein isoform 2 VIM 0.584 vimentin DES 0.568 desmin PRPH 0.515 peripherin INA 0.388 internexin neuronal intermediate filament protein, a... NEFL 0.366 neurofilament, light polypeptide 68kDa NEFM 0.362 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFH 0.302 neurofilament, heavy polypeptide 200kDa KRT8 0.263 keratin 8 KRT7 0.254 keratin 7 KRT75 0.241 keratin 75 KRT14 0.240 keratin 14 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 3 KRT5 0.236 keratin 5 KRT86 0.236 keratin 86 KRT17 0.235 keratin 17 KRT83 0.235 keratin 83 KRT81 0.233 keratin, hair, basic, 1 KRT6C 0.233 keratin 6C KRT6B 0.230 keratin 6B KRT85 0.230 keratin 85 KRT1 0.229 keratin 1 KRT84 0.229 keratin, hair, basic, 4 KRT3 0.229 keratin 3 KRT6A 0.228 keratin 6A KRT15 0.226 keratin 15 KRT76 0.225 keratin 76 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.