GFAP 11305

Name: GFAP	Sequence: fasta or formatted (431aa)		NCBI GI: 196115290
Description: glial fibrillary acidic protein isoform 2		Referenced in: Cytoskeleton
Other entries for this name: alt prot [432aa] glial fibrillary acidic protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.4 49 3 C cysteine 0.2 1 1 D aspartate 4.4 19 1 E glutamate 12.8 55 3 F phenylalanine 1.6 7 1 G glycine 3.7 16 2 H histidine 1.9 8 1 I isoleucine 3.5 15 1 K lysine 4.4 19 1 L leucine 13.0 56 2 M methionine 2.3 10 2 N asparagine 4.2 18 2 P proline 2.8 12 3 Q glutamine 6.3 27 2 R arginine 11.1 48 3 S serine 4.9 21 2 T threonine 4.9 21 1 V valine 3.9 17 1 W tryptophan 0.2 1 1 Y tyrosine 2.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glial fibrillary acidic protein isoform 2 GFAP 0.899 glial fibrillary acidic protein isoform 1 VIM 0.535 vimentin DES 0.522 desmin PRPH 0.479 peripherin INA 0.387 internexin neuronal intermediate filament protein, a... NEFL 0.365 neurofilament, light polypeptide 68kDa NEFM 0.359 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFH 0.300 neurofilament, heavy polypeptide 200kDa KRT7 0.256 keratin 7 KRT8 0.254 keratin 8 KRT75 0.241 keratin 75 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.236 PREDICTED: hypothetical protein isoform 3 KRT86 0.236 keratin 86 KRT5 0.236 keratin 5 KRT83 0.234 keratin 83 KRT81 0.232 keratin, hair, basic, 1 KRT6C 0.232 keratin 6C KRT14 0.231 keratin 14 KRT1 0.231 keratin 1 KRT6B 0.229 keratin 6B KRT85 0.229 keratin 85 KRT84 0.228 keratin, hair, basic, 4 KRT17 0.227 keratin 17 KRT6A 0.227 keratin 6A KRT3 0.227 keratin 3 KRT76 0.226 keratin 76 KRT4 0.223 keratin 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.