LMNB1 31485

Name: LMNB1	Sequence: fasta or formatted (586aa)		NCBI GI: 5031877
Description: lamin B1		Referenced in: Cytoskeleton Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 51 3 C cysteine 0.9 5 1 D aspartate 5.3 31 2 E glutamate 13.5 79 8 F phenylalanine 0.7 4 1 G glycine 4.1 24 2 H histidine 1.2 7 1 I isoleucine 3.6 21 1 K lysine 6.7 39 2 L leucine 11.1 65 3 M methionine 2.4 14 1 N asparagine 3.4 20 1 P proline 2.2 13 2 Q glutamine 5.3 31 3 R arginine 8.2 48 2 S serine 8.7 51 3 T threonine 6.0 35 2 V valine 5.1 30 3 W tryptophan 0.7 4 1 Y tyrosine 2.4 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lamin B1 LMNB2 0.587 lamin B2 LMNA 0.532 lamin A/C isoform 1 precursor LMNA 0.531 lamin A/C isoform 2 LMNA 0.515 lamin A/C isoform 3 DES 0.142 desmin PRPH 0.131 peripherin GFAP 0.127 glial fibrillary acidic protein isoform 1 GFAP 0.125 glial fibrillary acidic protein isoform 2 VIM 0.125 vimentin INA 0.110 internexin neuronal intermediate filament protein, a... KRT2 0.109 keratin 2 NEFM 0.104 neurofilament, medium polypeptide 150kDa isoform 1 ... KRT14 0.102 keratin 14 KRT76 0.100 keratin 76 NEFH 0.099 neurofilament, heavy polypeptide 200kDa KRT1 0.099 keratin 1 KRT4 0.099 keratin 4 KRT34 0.097 keratin 34 NEFL 0.097 neurofilament, light polypeptide 68kDa KRT75 0.096 keratin 75 KRT13 0.096 keratin 13 isoform a KRT33A 0.096 keratin 33A KRT3 0.095 keratin 3 KRT31 0.095 keratin 31 KRT74 0.095 keratin 6 irs4 KRT38 0.095 keratin 38 KRT33B 0.094 type I hair keratin 3B KRT80 0.094 keratin 80 isoform a KRT16 0.094 keratin 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.