NEFM 6357

Name: NEFM	Sequence: fasta or formatted (916aa)		NCBI GI: 157738649
Description: neurofilament, medium polypeptide 150kDa isoform 1		Referenced in: Cytoskeleton Neurons
Other entries for this name: alt prot [540aa] neurofilament, medium polypeptide 150kDa isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 69 2 C cysteine 0.1 1 1 D aspartate 3.8 35 2 E glutamate 20.2 185 6 F phenylalanine 1.2 11 1 G glycine 5.6 51 2 H histidine 1.9 17 1 I isoleucine 3.3 30 2 K lysine 12.4 114 3 L leucine 5.9 54 2 M methionine 1.0 9 1 N asparagine 1.5 14 1 P proline 4.0 37 2 Q glutamine 4.3 39 2 R arginine 4.0 37 2 S serine 9.7 89 3 T threonine 4.4 40 1 V valine 7.1 65 3 W tryptophan 0.3 3 1 Y tyrosine 1.7 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.584 neurofilament, medium polypeptide 150kDa isoform 2 ... NEFH 0.296 neurofilament, heavy polypeptide 200kDa INA 0.221 internexin neuronal intermediate filament protein, a... NEFL 0.218 neurofilament, light polypeptide 68kDa VIM 0.185 vimentin PRPH 0.173 peripherin DES 0.171 desmin GFAP 0.167 glial fibrillary acidic protein isoform 1 GFAP 0.166 glial fibrillary acidic protein isoform 2 KRT8 0.116 keratin 8 KRT75 0.108 keratin 75 KRT7 0.105 keratin 7 KRT17 0.103 keratin 17 KRT6C 0.102 keratin 6C KRT5 0.102 keratin 5 KRT16 0.101 keratin 16 KRT6B 0.101 keratin 6B KRT6A 0.101 keratin 6A KRT10 0.101 keratin 10 KRT4 0.100 keratin 4 KRT84 0.100 keratin, hair, basic, 4 KRT14 0.099 keratin 14 LOC100293351 0.098 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.098 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.098 PREDICTED: hypothetical protein isoform 3 KRT82 0.098 keratin 82 KRT86 0.098 keratin 86 KRT85 0.098 keratin 85 KRT81 0.097 keratin, hair, basic, 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.