LMNA 31484

Name: LMNA	Sequence: fasta or formatted (572aa)		NCBI GI: 5031875
Description: lamin A/C isoform 2		Referenced in: Cytoskeleton Nucleus and Nucleolus Prenylation and Related Modifications
Other entries for this name: alt prot [664aa] lamin A/C isoform 1 precursor alt prot [634aa] lamin A/C isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 53 2 C cysteine 0.2 1 1 D aspartate 5.8 33 2 E glutamate 12.2 70 3 F phenylalanine 1.2 7 1 G glycine 4.7 27 3 H histidine 2.1 12 4 I isoleucine 2.4 14 1 K lysine 6.8 39 2 L leucine 11.9 68 2 M methionine 1.6 9 1 N asparagine 3.0 17 1 P proline 1.7 10 2 Q glutamine 6.3 36 3 R arginine 10.5 60 2 S serine 8.4 48 2 T threonine 5.2 30 1 V valine 4.5 26 2 W tryptophan 0.7 4 1 Y tyrosine 1.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lamin A/C isoform 2 LMNA 0.991 lamin A/C isoform 1 precursor LMNA 0.933 lamin A/C isoform 3 LMNB1 0.545 lamin B1 LMNB2 0.536 lamin B2 DES 0.136 desmin PRPH 0.132 peripherin VIM 0.129 vimentin NEFL 0.121 neurofilament, light polypeptide 68kDa GFAP 0.117 glial fibrillary acidic protein isoform 1 NEFM 0.116 neurofilament, medium polypeptide 150kDa isoform 1 ... INA 0.114 internexin neuronal intermediate filament protein, a... GFAP 0.114 glial fibrillary acidic protein isoform 2 KRT8 0.110 keratin 8 KRT18 0.110 keratin 18 KRT18 0.110 keratin 18 KRT75 0.106 keratin 75 NEFH 0.103 neurofilament, heavy polypeptide 200kDa KRT5 0.102 keratin 5 KRT6C 0.099 keratin 6C KRT3 0.098 keratin 3 KRT6A 0.097 keratin 6A KRT6B 0.096 keratin 6B KRT4 0.096 keratin 4 KRT16 0.096 keratin 16 KRT78 0.095 keratin 5b KRT1 0.093 keratin 1 KRT7 0.093 keratin 7 KRT14 0.092 keratin 14 KRT80 0.091 keratin 80 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.