PRPH 12760

Name: PRPH	Sequence: fasta or formatted (470aa)		NCBI GI: 21264345
Description: peripherin		Referenced in: Cytoskeleton Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 43 2 C cysteine 0.4 2 1 D aspartate 4.0 19 2 E glutamate 13.8 65 3 F phenylalanine 3.0 14 1 G glycine 4.0 19 2 H histidine 1.9 9 2 I isoleucine 2.6 12 1 K lysine 4.5 21 2 L leucine 12.8 60 2 M methionine 1.3 6 1 N asparagine 3.0 14 1 P proline 3.0 14 3 Q glutamine 6.6 31 2 R arginine 10.2 48 2 S serine 9.8 46 4 T threonine 3.4 16 2 V valine 4.5 21 2 W tryptophan 0.2 1 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 peripherin DES 0.560 desmin VIM 0.545 vimentin GFAP 0.472 glial fibrillary acidic protein isoform 1 GFAP 0.440 glial fibrillary acidic protein isoform 2 INA 0.403 internexin neuronal intermediate filament protein, a... NEFL 0.357 neurofilament, light polypeptide 68kDa NEFM 0.344 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFH 0.276 neurofilament, heavy polypeptide 200kDa KRT8 0.275 keratin 8 KRT5 0.238 keratin 5 KRT75 0.237 keratin 75 KRT7 0.230 keratin 7 KRT6C 0.227 keratin 6C KRT6A 0.226 keratin 6A KRT6B 0.225 keratin 6B KRT84 0.225 keratin, hair, basic, 4 KRT4 0.222 keratin 4 LOC100293351 0.221 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.221 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.221 PREDICTED: hypothetical protein isoform 3 KRT86 0.221 keratin 86 KRT83 0.221 keratin 83 KRT73 0.219 keratin 73 KRT85 0.219 keratin 85 KRT3 0.218 keratin 3 KRT81 0.218 keratin, hair, basic, 1 KRT79 0.213 keratin 6L KRT71 0.211 keratin 71 KRT76 0.211 keratin 76 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.