DES 32878

Name: DES	Sequence: fasta or formatted (470aa)		NCBI GI: 55749932
Description: desmin		Referenced in: Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 44 2 C cysteine 0.2 1 1 D aspartate 4.9 23 2 E glutamate 12.1 57 3 F phenylalanine 2.6 12 1 G glycine 4.5 21 2 H histidine 1.3 6 1 I isoleucine 3.8 18 1 K lysine 4.7 22 2 L leucine 10.4 49 2 M methionine 2.1 10 2 N asparagine 4.3 20 2 P proline 2.1 10 1 Q glutamine 6.8 32 3 R arginine 9.1 43 2 S serine 7.7 36 4 T threonine 5.3 25 2 V valine 5.5 26 2 W tryptophan 0.2 1 1 Y tyrosine 3.0 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 desmin VIM 0.600 vimentin PRPH 0.558 peripherin GFAP 0.518 glial fibrillary acidic protein isoform 1 GFAP 0.478 glial fibrillary acidic protein isoform 2 INA 0.393 internexin neuronal intermediate filament protein, a... NEFL 0.369 neurofilament, light polypeptide 68kDa NEFM 0.339 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFH 0.295 neurofilament, heavy polypeptide 200kDa KRT8 0.266 keratin 8 KRT75 0.242 keratin 75 KRT7 0.240 keratin 7 KRT5 0.235 keratin 5 KRT6C 0.233 keratin 6C KRT84 0.231 keratin, hair, basic, 4 KRT6B 0.231 keratin 6B KRT4 0.227 keratin 4 KRT3 0.227 keratin 3 KRT6A 0.227 keratin 6A KRT76 0.225 keratin 76 KRT1 0.224 keratin 1 KRT79 0.221 keratin 6L LOC100293351 0.220 PREDICTED: hypothetical protein isoform 2 LOC100293351 0.220 PREDICTED: hypothetical protein isoform 1 LOC100293351 0.220 PREDICTED: hypothetical protein isoform 3 KRT86 0.220 keratin 86 KRT83 0.220 keratin 83 KRT74 0.219 keratin 6 irs4 KRT82 0.218 keratin 82 KRT81 0.217 keratin, hair, basic, 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.