Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169211412
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211412 PREDICTED: hypothetical protein [Homo sapiens]
(107 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211412 PREDICTED: hypothetical protein [Homo sapiens] 220 2e-58
gi|169211879 PREDICTED: hypothetical protein [Homo sapiens] 218 6e-58
gi|169210998 PREDICTED: hypothetical protein [Homo sapiens] 218 6e-58
gi|19111150 angiomotin isoform 2 [Homo sapiens] 35 0.013
gi|166064029 angiomotin isoform 1 [Homo sapiens] 35 0.013
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 31 0.19
gi|15150807 tumor protein p53 inducible nuclear protein 1 isofor... 31 0.25
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 30 0.42
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 30 0.42
gi|5902108 SRY-box 21 [Homo sapiens] 30 0.42
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 30 0.55
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 30 0.55
gi|122937450 shisa homolog 3 [Homo sapiens] 29 0.71
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 29 0.71
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 29 0.93
gi|73476377 LBXCOR1 homolog [Homo sapiens] 29 0.93
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 29 0.93
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 29 0.93
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 29 0.93
gi|219842244 periphilin 1 isoform 6 [Homo sapiens] 29 0.93
gi|48255929 periphilin 1 isoform 1 [Homo sapiens] 29 0.93
gi|41872349 periphilin 1 isoform 4 [Homo sapiens] 29 0.93
gi|41872344 periphilin 1 isoform 3 [Homo sapiens] 29 0.93
gi|41872339 periphilin 1 isoform 5 [Homo sapiens] 29 0.93
gi|41872368 periphilin 1 isoform 2 [Homo sapiens] 29 0.93
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 29 0.93
gi|194363768 homeobox D9 [Homo sapiens] 28 1.2
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 28 1.2
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 28 1.2
gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2 ... 28 1.2
>gi|169211412 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 220 bits (560), Expect = 2e-58
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
Query: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY 107
VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY
Sbjct: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY 107
>gi|169211879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 218 bits (556), Expect = 6e-58
Identities = 106/107 (99%), Positives = 107/107 (100%)
Query: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
Query: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY 107
VAAAGGVGLEAASSVHVHPWPAGIIAGSATR+KGTDWAPEDWVDIQY
Sbjct: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107
>gi|169210998 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 218 bits (556), Expect = 6e-58
Identities = 106/107 (99%), Positives = 107/107 (100%)
Query: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1 MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
Query: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY 107
VAAAGGVGLEAASSVHVHPWPAGIIAGSATR+KGTDWAPEDWVDIQY
Sbjct: 61 VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 35.0 bits (79), Expect = 0.013
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 9 AALRASRLAPTGAATTTTSVSTSPSATTEM-GWARAARACAGTPPGAQGDALHVAAAGGV 67
AA A+ AP+ A T+ + SP+A ++ A A A A P A A+ VA A
Sbjct: 509 AAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPA 568
Query: 68 GLEAASSVHVHPWPAGIIAGSATRQKGTDWAP 99
+ A + V V P PA A + + + AP
Sbjct: 569 PVPAPALVPV-PAPAAAQASAPAQTQAPTSAP 599
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 9 AALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVG 68
AA A+ + T A TTT V+ +P A A A A A +P A A V+ A
Sbjct: 480 AAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAATAAAVSPAAAGQ 537
Query: 69 LEAASSVHVHPWPAGIIAGSATRQKGTDWAP 99
+ AA+SV A +A SA AP
Sbjct: 538 IPAAASVA----SAAAVAPSAAAAAAVQVAP 564
Score = 30.8 bits (68), Expect = 0.25
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 7 PLAALRASRLAPTGAATTTTSV----------STSPSATTEMGWARAARACAGTPPGAQG 56
P+AA + AAT TT++ + +P+A A AA A P A G
Sbjct: 477 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG 536
Query: 57 D---ALHVAAAGGVGLEAASSVHVHPWPA 82
A VA+A V AA++ V PA
Sbjct: 537 QIPAAASVASAAAVAPSAAAAAAVQVAPA 565
Score = 29.6 bits (65), Expect = 0.55
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 17 APTGAATTTTSVS-TSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAASSV 75
AP AA T +++ T+ + TT M A A P A AAA AA++
Sbjct: 476 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAA-------AAAPSPATAAATAA 528
Query: 76 HVHPWPAGIIAGSATRQKGTDWAP 99
V P AG I +A+ AP
Sbjct: 529 AVSPAAAGQIPAAASVASAAAVAP 552
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 35.0 bits (79), Expect = 0.013
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 9 AALRASRLAPTGAATTTTSVSTSPSATTEM-GWARAARACAGTPPGAQGDALHVAAAGGV 67
AA A+ AP+ A T+ + SP+A ++ A A A A P A A+ VA A
Sbjct: 918 AAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPA 977
Query: 68 GLEAASSVHVHPWPAGIIAGSATRQKGTDWAP 99
+ A + V V P PA A + + + AP
Sbjct: 978 PVPAPALVPV-PAPAAAQASAPAQTQAPTSAP 1008
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 9 AALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVG 68
AA A+ + T A TTT V+ +P A A A A A +P A A V+ A
Sbjct: 889 AAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAATAAAVSPAAAGQ 946
Query: 69 LEAASSVHVHPWPAGIIAGSATRQKGTDWAP 99
+ AA+SV A +A SA AP
Sbjct: 947 IPAAASVA----SAAAVAPSAAAAAAVQVAP 973
Score = 30.8 bits (68), Expect = 0.25
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 7 PLAALRASRLAPTGAATTTTSV----------STSPSATTEMGWARAARACAGTPPGAQG 56
P+AA + AAT TT++ + +P+A A AA A P A G
Sbjct: 886 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG 945
Query: 57 D---ALHVAAAGGVGLEAASSVHVHPWPA 82
A VA+A V AA++ V PA
Sbjct: 946 QIPAAASVASAAAVAPSAAAAAAVQVAPA 974
Score = 29.6 bits (65), Expect = 0.55
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 17 APTGAATTTTSVS-TSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAASSV 75
AP AA T +++ T+ + TT M A A P A AAA AA++
Sbjct: 885 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAA-------AAAPSPATAAATAA 937
Query: 76 HVHPWPAGIIAGSATRQKGTDWAP 99
V P AG I +A+ AP
Sbjct: 938 AVSPAAAGQIPAAASVASAAAVAP 961
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 31.2 bits (69), Expect = 0.19
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 6 RPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
RPL+A + S P GA S + S+T +G AARA A +P + D+ AAG
Sbjct: 818 RPLSASQPS--LPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPD--RRDSASPGAAG 873
Query: 66 GV 67
G+
Sbjct: 874 GL 875
>gi|15150807 tumor protein p53 inducible nuclear protein 1 isoform a
[Homo sapiens]
Length = 240
Score = 30.8 bits (68), Expect = 0.25
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 19 TGAATTTTSVSTSPSATT-----EMGWARAARACAGTPPGAQG-DALHVAAAGGVGLEAA 72
T TT V TSP M +C G +G D LH ++ V +
Sbjct: 105 TAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRVEAQNE 164
Query: 73 SSVHVHPWPAGIIAGSATRQKGTDWAPEDWV 103
H+H + A + A + ++ + P W+
Sbjct: 165 MGQHIHCYVAALAAHTTFLEQPKSFRPSQWI 195
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 30.0 bits (66), Expect = 0.42
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 22 ATTTTSVSTSPSATTEMGWARAARACAGTPP--GAQGDALHVAAAGGVGLEAAS 73
+T ++S S+S S T R R+ AG+PP A G GGVG A+
Sbjct: 2 STASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVAAAGSGNGAGGGGGVGCAPAA 55
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 20 GAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG-GVGLEAASSVHVH 78
G + TS SP EMG A A P Q +A +AA G G E AS +
Sbjct: 126 GGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASELAEV 185
Query: 79 PWPAGIIAG 87
P AG G
Sbjct: 186 PAAAGETRG 194
>gi|5902108 SRY-box 21 [Homo sapiens]
Length = 276
Score = 30.0 bits (66), Expect = 0.42
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 9 AALRASRL-----APTGAATTTTSVSTSPSATTEMG--WARAARACAGTP-------PGA 54
AA A+R+ A AA + + SP + ++G A + + +G P P A
Sbjct: 141 AAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGYPTA 200
Query: 55 QGDALHVAAAGGVGLEAASSVHVHPWPA 82
A H AAA AA+ H H P+
Sbjct: 201 GAGAFHGAAAAAAAAAAAAGGHTHSHPS 228
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 29.6 bits (65), Expect = 0.55
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 6 RPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
R L+ LR S GAAT+ S TT + W A A PPG++ L+ +++
Sbjct: 349 RQLSRLRRSPPTAPGAATS----SRHAWDTTALLWLATVMAPA-PPPGSRAGPLYFSSSS 403
Query: 66 GVGLEAASSVHVHPWPA 82
+EAA P P+
Sbjct: 404 ATLVEAAERTASPPGPS 420
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 29.6 bits (65), Expect = 0.55
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 6 RPLAALRASRLAPTGAA--------TTTTSVSTSP-SATTEMGWARAARACAGTPPGAQG 56
+PL + A L+P+G +TT S SP SA + ACAGT PGAQ
Sbjct: 563 QPLDSPAAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQP 622
Query: 57 DA 58
A
Sbjct: 623 GA 624
>gi|122937450 shisa homolog 3 [Homo sapiens]
Length = 238
Score = 29.3 bits (64), Expect = 0.71
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 7 PLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARAC---AGTPPGAQGDALHVAA 63
P+ S AP+ ++T TS S++ + +ARA C + PP ++H+A
Sbjct: 147 PMILTSTSPRAPSRQSSTATSSSSTGGSIRRFSFARAEPGCLVPSPPPPYTTSHSIHLAQ 206
Query: 64 AGG 66
G
Sbjct: 207 PSG 209
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 5 LRPLAALRASRLA-PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPG----AQGDAL 59
L+P AA+ SR + P+ + + +S S SPS MG+ A PPG GD+L
Sbjct: 1239 LQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPAMGFTTLATGYPSPPPGPAPAGPGDSL 1298
Query: 60 HV 61
V
Sbjct: 1299 DV 1300
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 18 PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
PT TTTT+V+T AT ++ +GTPP A + A G
Sbjct: 2662 PTVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 2704
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 18 PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
PT TTTT+V+T AT ++ +GTPP A + A G
Sbjct: 3919 PTVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLITTATTITATG 3961
Score = 26.2 bits (56), Expect = 6.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 19 TGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
T TTTT+V+T AT ++ +GTPP A + A G
Sbjct: 2106 TVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 2147
Score = 26.2 bits (56), Expect = 6.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 19 TGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
T TTTT+V+T AT ++ +GTPP A + A G
Sbjct: 3363 TVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 3404
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 23 TTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
TTTT+V+T AT ++ +GTPP A + A G
Sbjct: 4657 TTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 4694
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 28.9 bits (63), Expect = 0.93
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 18 PTGAATTTTSVSTSPSATT-----EMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAA 72
P+GAA +V+ + +A T M W A + P AQ A VAAA AA
Sbjct: 421 PSGAAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAA 480
Query: 73 SSVHVHPWPAGIIAGSATRQKG 94
++ P + ++ G
Sbjct: 481 AAAAGSGAPEPLDGAEPAKESG 502
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 10 ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
A+ S+ T A TTT + P A T A AA A A PP G GD + A
Sbjct: 273 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 331
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 10 ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
A+ S+ T A TTT + P A T A AA A A PP G GD + A
Sbjct: 258 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 316
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 10 ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
A+ S+ T A TTT + P A T A AA A A PP G GD + A
Sbjct: 273 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 331
>gi|219842244 periphilin 1 isoform 6 [Homo sapiens]
Length = 434
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 134 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 178
>gi|48255929 periphilin 1 isoform 1 [Homo sapiens]
Length = 458
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 233
>gi|41872349 periphilin 1 isoform 4 [Homo sapiens]
Length = 319
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 141 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 185
>gi|41872344 periphilin 1 isoform 3 [Homo sapiens]
Length = 367
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 233
>gi|41872339 periphilin 1 isoform 5 [Homo sapiens]
Length = 258
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 141 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 185
>gi|41872368 periphilin 1 isoform 2 [Homo sapiens]
Length = 374
Score = 28.9 bits (63), Expect = 0.93
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 2 RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
RD+ RP+ +L+ SR +G+A +++ V PS TE A AA
Sbjct: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 240
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 28.9 bits (63), Expect = 0.93
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 20 GAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH-VAAAGGVGLEAASSVHVH 78
G +TT++ T P + + G PPGA+ H A GG +
Sbjct: 490 GPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQ 549
Query: 79 PWPAGIIAGS----ATRQKGTDWAPE 100
P P G+ + AT GT PE
Sbjct: 550 PMPPGVGTSTSHQPATPSGGTAQTPE 575
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 28.5 bits (62), Expect = 1.2
Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 26/87 (29%)
Query: 17 APTGAATTTTSVSTSPSAT---TEMGWAR-------------------AARACAGTPPGA 54
AP AA+TT+S STS S++ TE AR AA A GT PGA
Sbjct: 169 APATAASTTSSSSTSLSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGA 228
Query: 55 QGDALHVAAAGGVGLEAASSVHVHPWP 81
AA G G S+ HP P
Sbjct: 229 GIG----AATGTGGSSEPSACSDHPIP 251
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 2 RDRLRPLAALRASRLAP--TGAATTTTSVSTSPSATTE 37
RD RP + +R P TGA T TT + PSA+TE
Sbjct: 1678 RDITRPPKTVATTRPTPHPTGAQTQTTFTTHMPSASTE 1715
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 17 APTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAASSVH 76
+P+G++++++S +++ SA+ A AA A A +P G GL SS+
Sbjct: 119 SPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLL-----------AGLPRFSSLS 167
Query: 77 VHPWPAGI 84
P P G+
Sbjct: 168 PPPPPPGL 175
>gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2
[Homo sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 1.2
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 4 RLRPLAALRASRLA----PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDAL 59
+L+ LAAL A+ A P+G TTS S T+ G + ++ + P A AL
Sbjct: 256 QLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGAL 315
Query: 60 HVAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGT 95
A GL S + G+ GS+ GT
Sbjct: 316 QTLAGATAGLNVGSLAGMAALNGGL--GSSGLSNGT 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.125 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,361,674
Number of Sequences: 37866
Number of extensions: 188821
Number of successful extensions: 1396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1288
Number of HSP's gapped (non-prelim): 156
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.