CUGBP1 27097

Name: CUGBP1	Sequence: fasta or formatted (483aa)		NCBI GI: 38570081
Description: CUG triplet repeat, RNA-binding protein 1 isoform 2		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [482aa] CUG triplet repeat, RNA-binding protein 1 isoform 1 alt prot [486aa] CUG triplet repeat, RNA-binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 53 4 C cysteine 1.4 7 2 D aspartate 3.5 17 1 E glutamate 3.3 16 2 F phenylalanine 3.7 18 1 G glycine 8.3 40 2 H histidine 1.4 7 2 I isoleucine 3.5 17 1 K lysine 5.0 24 2 L leucine 9.9 48 2 M methionine 4.3 21 1 N asparagine 6.0 29 2 P proline 4.6 22 2 Q glutamine 8.7 42 3 R arginine 2.9 14 1 S serine 9.9 48 5 T threonine 5.6 27 2 V valine 4.3 21 2 W tryptophan 0.4 2 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CUG triplet repeat, RNA-binding protein 1 isoform 2 ... CUGBP1 0.992 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... CUGBP1 0.987 CUG triplet repeat, RNA-binding protein 1 isoform 3 ... CUGBP2 0.810 CUG triplet repeat, RNA binding protein 2 isoform 3 ... CUGBP2 0.803 CUG triplet repeat, RNA binding protein 2 isoform 4... CUGBP2 0.803 CUG triplet repeat, RNA binding protein 2 isoform 1 ... CUGBP2 0.803 CUG triplet repeat, RNA binding protein 2 isoform 2... TNRC4 0.378 trinucleotide repeat containing 4 BRUNOL6 0.367 bruno-like 6, RNA binding protein BRUNOL4 0.362 bruno-like 4, RNA binding protein isoform 2 BRUNOL4 0.361 bruno-like 4, RNA binding protein isoform 1 BRUNOL4 0.359 bruno-like 4, RNA binding protein isoform 3 BRUNOL5 0.359 bruno-like 5, RNA binding protein isoform 1 BRUNOL4 0.299 bruno-like 4, RNA binding protein isoform 4 BRUNOL5 0.112 bruno-like 5, RNA binding protein isoform 2 ELAVL1 0.064 ELAV-like 1 ELAVL4 0.060 ELAV-like 4 isoform 1 ELAVL4 0.060 ELAV-like 4 isoform 5 ELAVL4 0.060 ELAV-like 4 isoform 4 ELAVL4 0.060 ELAV-like 4 isoform 3 ELAVL4 0.060 ELAV-like 4 isoform 2 ELAVL2 0.059 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL3 0.058 ELAV-like protein 3 isoform 1 ELAVL3 0.055 ELAV-like protein 3 isoform 2 MYEF2 0.053 myelin expression factor 2 RBM4 0.051 RNA binding motif protein 4 RBM4B 0.051 RNA binding motif protein 4B RBM45 0.049 RNA binding motif protein 45 TARDBP 0.046 TAR DNA binding protein MSI1 0.045 musashi 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.