LOC100128511 8282

Name: LOC100128511	Sequence: fasta or formatted (436aa)		NCBI GI: 169201944
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {436aa} PREDICTED: hypothetical protein alt mRNA {436aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.6 55 2 C cysteine 1.8 8 1 D aspartate 3.2 14 1 E glutamate 3.9 17 1 F phenylalanine 1.4 6 1 G glycine 11.5 50 3 H histidine 3.4 15 1 I isoleucine 1.8 8 1 K lysine 1.4 6 1 L leucine 6.9 30 3 M methionine 0.9 4 1 N asparagine 0.2 1 1 P proline 13.1 57 3 Q glutamine 2.3 10 1 R arginine 15.8 69 5 S serine 9.2 40 2 T threonine 3.7 16 1 V valine 5.7 25 2 W tryptophan 0.9 4 1 Y tyrosine 0.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100128511 1.000 PREDICTED: hypothetical protein LOC100128511 1.000 PREDICTED: hypothetical protein SRRM1 0.041 serine/arginine repetitive matrix 1 LOC338758 0.035 PREDICTED: hypothetical protein LOC338758 0.035 PREDICTED: hypothetical protein LOC338758 0.035 PREDICTED: hypothetical protein FLJ37078 0.031 hypothetical protein LOC222183 LOC100290359 0.031 PREDICTED: hypothetical protein XP_002346414 LOC100287202 0.031 PREDICTED: hypothetical protein XP_002342114 LOC643355 0.030 PREDICTED: hypothetical protein LOC643355 0.030 PREDICTED: hypothetical protein LOC643355 0.028 PREDICTED: hypothetical protein COL2A1 0.026 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.026 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.026 alpha 1 type I collagen preproprotein FLJ22184 0.026 PREDICTED: hypothetical protein FLJ22184 COL25A1 0.026 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.026 collagen, type XXV, alpha 1 isoform 2 LOC100293055 0.025 PREDICTED: similar to COL22A1 protein COL22A1 0.025 collagen, type XXII, alpha 1 COL3A1 0.024 collagen type III alpha 1 preproprotein COL23A1 0.024 collagen, type XXIII, alpha 1 COL7A1 0.023 alpha 1 type VII collagen precursor LOC100130360 0.023 PREDICTED: hypothetical protein COL16A1 0.023 alpha 1 type XVI collagen precursor LOC100291807 0.023 PREDICTED: hypothetical protein XP_002345507 FLJ22184 0.023 PREDICTED: hypothetical protein FLJ22184 COL17A1 0.022 alpha 1 type XVII collagen AGAP2 0.022 centaurin, gamma 1 isoform PIKE-L Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.