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Search of human proteins with 169179740
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens] 478 e-135
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens] 478 e-135
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens] 478 e-135
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 41 8e-04
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 41 8e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 8e-04
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|153792074 proline rich 12 [Homo sapiens] 40 0.002
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 39 0.003
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 39 0.003
gi|188536004 zinc finger protein 469 [Homo sapiens] 39 0.003
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 39 0.003
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 39 0.004
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 39 0.005
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 39 0.005
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 39 0.005
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 39 0.005
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 39 0.005
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 39 0.005
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 39 0.005
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 38 0.008
>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 478 bits (1230), Expect = e-135
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP
Sbjct: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
Query: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID
Sbjct: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
Query: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH
Sbjct: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
Query: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE
Sbjct: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 478 bits (1230), Expect = e-135
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP
Sbjct: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
Query: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID
Sbjct: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
Query: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH
Sbjct: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
Query: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE
Sbjct: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 478 bits (1230), Expect = e-135
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP
Sbjct: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSP 60
Query: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID
Sbjct: 61 PRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID 120
Query: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH
Sbjct: 121 TAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIH 180
Query: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE
Sbjct: 181 VPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/192 (27%), Positives = 65/192 (33%), Gaps = 38/192 (19%)
Query: 6 LGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVP 65
LG+ASR C + R R N G G RG GGAAA + + RG P
Sbjct: 124 LGRASR---PGCPPSPRGSRQERGANSPGRSGA-------RGCGGAAALQQEPTNFRGRP 173
Query: 66 RPSRR---PLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTA 122
RP R P LP P P GR P + + G G
Sbjct: 174 RPGARGTDPPGRTLPAPLARPSTQP--------------GRRPGLGRAASPLGPRGAGVT 219
Query: 123 ALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVP 182
+G G R R R P PLP ++ +A L+ R + P
Sbjct: 220 GAGPATQG---GRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLATCRG--------NAP 268
Query: 183 TPEHTQTPPESE 194
TP T ES+
Sbjct: 269 TPSACLTWLESK 280
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/192 (27%), Positives = 65/192 (33%), Gaps = 38/192 (19%)
Query: 6 LGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVP 65
LG+ASR C + R R N G G RG GGAAA + + RG P
Sbjct: 124 LGRASR---PGCPPSPRGSRQERGANSPGRSGA-------RGCGGAAALQQEPTNFRGRP 173
Query: 66 RPSRR---PLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTA 122
RP R P LP P P GR P + + G G
Sbjct: 174 RPGARGTDPPGRTLPAPLARPSTQP--------------GRRPGLGRAASPLGPRGAGVT 219
Query: 123 ALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVP 182
+G G R R R P PLP ++ +A L+ R + P
Sbjct: 220 GAGPATQG---GRDRGRWGRWVRRRVPCPLPGLRPHERAGAALLATCRG--------NAP 268
Query: 183 TPEHTQTPPESE 194
TP T ES+
Sbjct: 269 TPSACLTWLESK 280
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 41.2 bits (95), Expect = 8e-04
Identities = 60/216 (27%), Positives = 76/216 (35%), Gaps = 26/216 (12%)
Query: 3 GRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES----Q 58
GRGLG R+VG P SG R AGN+ G S + RGPG AGS
Sbjct: 48 GRGLGAKVRVVGRP----GNSGGRRRAGNRAWGSGRRGKSRRSRGPGPWPAGSGGPRCPS 103
Query: 59 SPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHG 118
+P GV R R + VS W F R +G L E V GG G
Sbjct: 104 APSDGVRRCPRLTAHAAVTWVGVSD--WRGSFLKLS-SSRSTRG-LVLGEGVGVGAGGEG 159
Query: 119 IDTAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQ 178
A ER R+ +S + ++ A P S++ W GL+
Sbjct: 160 GGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSR-RPWGRAGGLR-- 216
Query: 179 IHVPTPEHTQTPPESETASGRLRSSGLRGGTGAGAA 214
P A G+ R S R + AA
Sbjct: 217 -----------PRGKRPARGKKRPSSQRRCSSPSAA 241
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 41.2 bits (95), Expect = 8e-04
Identities = 60/216 (27%), Positives = 76/216 (35%), Gaps = 26/216 (12%)
Query: 3 GRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES----Q 58
GRGLG R+VG P SG R AGN+ G S + RGPG AGS
Sbjct: 48 GRGLGAKVRVVGRP----GNSGGRRRAGNRAWGSGRRGKSRRSRGPGPWPAGSGGPRCPS 103
Query: 59 SPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHG 118
+P GV R R + VS W F R +G L E V GG G
Sbjct: 104 APSDGVRRCPRLTAHAAVTWVGVSD--WRGSFLKLS-SSRSTRG-LVLGEGVGVGAGGEG 159
Query: 119 IDTAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQ 178
A ER R+ +S + ++ A P S++ W GL+
Sbjct: 160 GGEGAAGAASSLSERSSERVELQSDTDDSDTRVAEGARPRPGPTSSR-RPWGRAGGLR-- 216
Query: 179 IHVPTPEHTQTPPESETASGRLRSSGLRGGTGAGAA 214
P A G+ R S R + AA
Sbjct: 217 -----------PRGKRPARGKKRPSSQRRCSSPSAA 241
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 41.2 bits (95), Expect = 8e-04
Identities = 60/198 (30%), Positives = 70/198 (35%), Gaps = 34/198 (17%)
Query: 36 RGGARWSSKPRGPGGA-AAGSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSG 94
R GA + PR P GA AA + + PP P P P+A P + A A PS
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 95 LPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGSRENPPSPLPA 154
P + P R A A L P + +G R PP P A
Sbjct: 163 GPAQ-PGPRAQRA--------------APLAAPPPAP-AAPPAVAPPAGPRRAPP-PAVA 205
Query: 155 ALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPE--SETASGRLRSSGLR------ 206
A E P Q P Q P P Q PPE + A G R LR
Sbjct: 206 AREPPLPPPPQ-------PPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYL 258
Query: 207 GGTGAGAASRGNRTVVTG 224
GG+G GA R R V G
Sbjct: 259 GGSG-GAGGRLTRGRVQG 275
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 40.0 bits (92), Expect = 0.002
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 25 RSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESVSPC 84
R RPA G + S+ G G G+E RG PRP+R P + P+P V+
Sbjct: 137 RIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVA-- 194
Query: 85 AWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGS 144
A GP+ L R P GR S+E + T L R + P + R R+ S +
Sbjct: 195 --SAAAGPATL--RAPPGRGASSETMW--------PTENLSSRRRAPPQ-RRRTRAPSIA 241
Query: 145 RENPPS 150
R P S
Sbjct: 242 RSLPGS 247
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 40.0 bits (92), Expect = 0.002
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 25 RSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESVSPC 84
R RPA G + S+ G G G+E RG PRP+R P + P+P V+
Sbjct: 258 RIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVA-- 315
Query: 85 AWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGS 144
A GP+ L R P GR S+E + T L R + P + R R+ S +
Sbjct: 316 --SAAAGPATL--RAPPGRGASSETMW--------PTENLSSRRRAPPQ-RRRTRAPSIA 362
Query: 145 RENPPS 150
R P S
Sbjct: 363 RSLPGS 368
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 40.0 bits (92), Expect = 0.002
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 25 RSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESVSPC 84
R RPA G + S+ G G G+E RG PRP+R P + P+P V+
Sbjct: 258 RIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHGVA-- 315
Query: 85 AWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGS 144
A GP+ L R P GR S+E + T L R + P + R R+ S +
Sbjct: 316 --SAAAGPATL--RAPPGRGASSETMW--------PTENLSSRRRAPPQ-RRRTRAPSIA 362
Query: 145 RENPPS 150
R P S
Sbjct: 363 RSLPGS 368
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 39.7 bits (91), Expect = 0.002
Identities = 55/230 (23%), Positives = 77/230 (33%), Gaps = 34/230 (14%)
Query: 5 GLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKP-----------RGPGGAAA 53
G G+ S+ S +A + + P G GG +P G G AA
Sbjct: 342 GAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAG 401
Query: 54 GSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNH 113
G+ PPR P + L P + + G P+G L
Sbjct: 402 GATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGF 461
Query: 114 FGGHGIDTAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARP 173
GG D + GP + S PP P A +S P+ Q ++
Sbjct: 462 GGGQAQDLSKAPSYSGGPPQPPS----------GPPPPGLATCQSYSPDQLQGQLY---- 507
Query: 174 GLQAQIHVPTPEHTQTPPESETASGRL-----RSSGLRG-GTGAGAASRG 217
G+Q + + H+Q P TAS L S L G G G G +S G
Sbjct: 508 GVQGEPYPGPAAHSQGLP---TASPSLSYSTGHSPALSGHGGGWGPSSLG 554
Score = 28.5 bits (62), Expect = 5.0
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
Query: 23 SGRSRPAGNKCGSRGGARWSSKPRGP---GGAAAGSESQSPPRGVPRPSRRPLAHPLPCE 79
S RSRPA + G + P GP G ++ PPR RP RPL
Sbjct: 1127 SCRSRPALSPLGDIDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPL------- 1179
Query: 80 SVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGID-TAALEIRDKGPERGESRL 138
V A PA + P+GR + GG ++ L+I+ P+ GE L
Sbjct: 1180 EVPTTAGPASASTPTDGAKKPRGRGRGRGRKAEEAGGTRLEPLKPLKIKLSVPKAGEG-L 1238
Query: 139 RSESG 143
+ SG
Sbjct: 1239 GTSSG 1243
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 79/215 (36%), Gaps = 38/215 (17%)
Query: 13 VGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPL 72
VGSPC AA ++ P S G A +PRGP AA ++ PP P P R
Sbjct: 320 VGSPCPAAEPVSQAGPP-----SPGHA---GRPRGP--EAARPCARGPPSQEPGPPR--- 366
Query: 73 AHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPE 132
P PC A L R +LP ++ H G H + +R +
Sbjct: 367 --PWPCALRPRPRLRAALPSRRLFSRGAAQQLPCCYKL--HPGRH------VPLRPFKEK 416
Query: 133 RGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRAR----PGLQ---AQIHVPTPE 185
E+R R P P L+ NS + + R R PG A+ P P
Sbjct: 417 HSEARRRL--------PEPRQLHLQPVGANSVERAARRRRTRPEPGPARRGARAEPPGPP 468
Query: 186 HTQTPPESETASGRLRSSGLRGGTGAGAASRGNRT 220
Q PP S S ++ G AG + G R+
Sbjct: 469 TLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARS 503
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 39.3 bits (90), Expect = 0.003
Identities = 59/215 (27%), Positives = 79/215 (36%), Gaps = 38/215 (17%)
Query: 13 VGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPL 72
VGSPC AA ++ P S G A +PRGP AA ++ PP P P R
Sbjct: 320 VGSPCPAAEPVSQAGPP-----SPGHA---GRPRGP--EAARPCARGPPSQEPGPPR--- 366
Query: 73 AHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPE 132
P PC A L R +LP ++ H G H + +R +
Sbjct: 367 --PWPCALRPRPRLRAALPSRRLFSRGAAQQLPCCYKL--HPGRH------VPLRPFKEK 416
Query: 133 RGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRAR----PGLQ---AQIHVPTPE 185
E+R R P P L+ NS + + R R PG A+ P P
Sbjct: 417 HSEARRRL--------PEPRQLHLQPVGANSVERAARRRRTRPEPGPARRGARAEPPGPP 468
Query: 186 HTQTPPESETASGRLRSSGLRGGTGAGAASRGNRT 220
Q PP S S ++ G AG + G R+
Sbjct: 469 TLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARS 503
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 39.3 bits (90), Expect = 0.003
Identities = 47/159 (29%), Positives = 57/159 (35%), Gaps = 18/159 (11%)
Query: 4 RGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAA----------A 53
RG A + GSP + G ++ + G R R S P P GAA A
Sbjct: 3212 RGKRSAGKAAGSPGDPWGQEGEAKK--DSPGERAKPRARSTPSNPDGAATPDSASATALA 3269
Query: 54 GSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNH 113
+ S PPR P PS P A P +P AC PS K R P ++ H
Sbjct: 3270 DAGSPGPPRTTPSPSPDPWAGGEPLLQATP-VHEACKDPSRDCHHCGK-RFPKPFKLQRH 3327
Query: 114 FGGHGIDTAALEIRDKG--PERGE--SRLRSESGSRENP 148
H L R PE GE + L G E P
Sbjct: 3328 LAVHSPQRVYLCPRCPRVYPEHGELLAHLGGAHGLLERP 3366
Score = 28.1 bits (61), Expect = 6.6
Identities = 45/199 (22%), Positives = 65/199 (32%), Gaps = 35/199 (17%)
Query: 22 RSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESV 81
RSG ++ C S G + P A+ +S SP + P PL
Sbjct: 2359 RSGATKMPRVTCPSTGLGL--GRTTAPSSTASDFQSDSPQSHRNASHQTPQGDPL----- 2411
Query: 82 SPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGG---HG---IDTAALEIRDKGPERGE 135
GP L QR + A + G HG + A R GP
Sbjct: 2412 ---------GPQDLKQRSRGYKKKPASTENGQWKGQAPHGPVTCEVCAASFRS-GPGLSR 2461
Query: 136 SRLRSESGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVP----------TPE 185
+ R P P PAAL +Q+P + + +P + V P
Sbjct: 2462 HKARKHRPHPGAPAEPSPAALPAQQP--LEPLAQKCQPPRKKSHRVSGKERPNHSRGDPS 2519
Query: 186 HTQTPPESETASGRLRSSG 204
H PP ++ + LR+ G
Sbjct: 2520 HVTQPPPAQGSKEVLRAPG 2538
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 39.3 bits (90), Expect = 0.003
Identities = 49/172 (28%), Positives = 61/172 (35%), Gaps = 33/172 (19%)
Query: 55 SESQSPPRGVPRPSRRPLAHPLPC--ESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTN 112
S S S PR PRPS P A P P + +P PS P PK L
Sbjct: 912 SRSPSSPRHAPRPSDAPSASPTPSANSTTQSQTFPCPQAPSQHPPSPPKRCL-------- 963
Query: 113 HFGGHG-----IDTAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLS 167
+GG + AA E G S L ES R + L A LE + P A+
Sbjct: 964 SYGGTSQLRVPEEPAAEEPASPEESSGLSLLHQESKRR----AMLAAVLEQELPALAENL 1019
Query: 168 VWRARPGLQAQI--------------HVPTPEHTQTPPESETASGRLRSSGL 205
+ A++ H+ TP Q E GRLR+ GL
Sbjct: 1020 HQEQKQEQGARLGRNHVEELLRCLGAHIHTPNRRQLAQELRALQGRLRAQGL 1071
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES--- 57
MKG G G R S + S R RP G+RGGAR RG G AA G
Sbjct: 141 MKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGV-RGQGAAAVGPTGPRP 199
Query: 58 -------QSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQ--RWPKGRLPSAE 108
++PP G RRPL P +P P+ P+G P+ R P +
Sbjct: 200 TGAPPSRRTPPPGP----RRPLRSPHSGSGWTPARPPS--PPAGAPEALRPPASTTRAPA 253
Query: 109 QVTNHFGGHGI 119
+T F G+
Sbjct: 254 PLTLSFSARGL 264
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES--- 57
MKG G G R S + S R RP G+RGGAR RG G AA G
Sbjct: 141 MKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGV-RGQGAAAVGPTGPRP 199
Query: 58 -------QSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQ--RWPKGRLPSAE 108
++PP G RRPL P +P P+ P+G P+ R P +
Sbjct: 200 TGAPPSRRTPPPGP----RRPLRSPHSGSGWTPARPPS--PPAGAPEALRPPASTTRAPA 253
Query: 109 QVTNHFGGHGI 119
+T F G+
Sbjct: 254 PLTLSFSARGL 264
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 38.9 bits (89), Expect = 0.004
Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 1 MKGRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES--- 57
MKG G G R S + S R RP G+RGGAR RG G AA G
Sbjct: 141 MKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGV-RGQGAAAVGPTGPRP 199
Query: 58 -------QSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQ--RWPKGRLPSAE 108
++PP G RRPL P +P P+ P+G P+ R P +
Sbjct: 200 TGAPPSRRTPPPGP----RRPLRSPHSGSGWTPARPPS--PPAGAPEALRPPASTTRAPA 253
Query: 109 QVTNHFGGHGI 119
+T F G+
Sbjct: 254 PLTLSFSARGL 264
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 38.9 bits (89), Expect = 0.004
Identities = 57/240 (23%), Positives = 88/240 (36%), Gaps = 32/240 (13%)
Query: 6 LGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSES-------- 57
+G SR SP A + ++RP+ + + +S P P AA + S
Sbjct: 263 MGVDSRTSCSP-QKAQEANKARPSAWEPAAGNSPARASVPAAPNPAATSATSVHVRSPAR 321
Query: 58 -------QSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQV 110
+P G RP R + P+ S +PC A P+ +P P R P+ Q
Sbjct: 322 PSESRLAPTPTEGKVRP-RVTNSSPMGWSSAAPCTAAAASHPA-VPPSAPDPR-PATPQ- 377
Query: 111 TNHFGGHGIDTAALEIRDKGPERGESRLRSESGSRENPPSPLPAALESQKPNSAQLSVWR 170
GG AA P+ S S S + +PP+ P+A +Q+ +
Sbjct: 378 ----GGGAPRVAA-------PQTTLSS-SSTSAATVDPPAWTPSASRTQQARNKFFQTSA 425
Query: 171 ARPGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRGNRTVVTGNVPRTE 230
PG PTP + S+ + L AGA + G + T VP ++
Sbjct: 426 VPPGTSLSGRGPTPSLVLSKDSSKEQARNFLKQALSALEEAGAPAPGRPSPATAAVPSSQ 485
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 38.5 bits (88), Expect = 0.005
Identities = 50/194 (25%), Positives = 65/194 (33%), Gaps = 18/194 (9%)
Query: 34 GSRGGARWSSK--PRGPGGAAA--GSESQSPP---RGVPRPSRRPLAHPLPCES------ 80
G RG + K P GPGG G ++ P RG P P P LP +
Sbjct: 961 GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK 1020
Query: 81 --VSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRL 138
P GP+GL + LP A+ GG G + G ERG +
Sbjct: 1021 GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG-ERGSAGT 1079
Query: 139 RSESG--SRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETA 196
G R P P A E P R G+Q + +P P P +
Sbjct: 1080 AGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGD 1139
Query: 197 SGRLRSSGLRGGTG 210
G + G +G G
Sbjct: 1140 KGEIGEPGQKGSKG 1153
Score = 37.4 bits (85), Expect = 0.011
Identities = 51/189 (26%), Positives = 66/189 (34%), Gaps = 22/189 (11%)
Query: 24 GRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPP--RGVPRPSRRPLAHPLPCESV 81
G+ P G + GSRG + KP GP G + G PP RG P
Sbjct: 892 GQRGPTGPR-GSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQ------------- 936
Query: 82 SPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSE 141
P +P GP G P + P T G G + +GP GE+
Sbjct: 937 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP-TGET---GP 992
Query: 142 SGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLR 201
G R +P P P E P +A + PG Q P + P G
Sbjct: 993 IGERGHPGPPGPPG-EQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG 1051
Query: 202 SSGLRGGTG 210
+ GL+GG G
Sbjct: 1052 APGLKGGEG 1060
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 38.5 bits (88), Expect = 0.005
Identities = 50/194 (25%), Positives = 65/194 (33%), Gaps = 18/194 (9%)
Query: 34 GSRGGARWSSK--PRGPGGAAA--GSESQSPP---RGVPRPSRRPLAHPLPCES------ 80
G RG + K P GPGG G ++ P RG P P P LP +
Sbjct: 910 GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK 969
Query: 81 --VSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRL 138
P GP+GL + LP A+ GG G + G ERG +
Sbjct: 970 GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG-ERGSAGT 1028
Query: 139 RSESG--SRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETA 196
G R P P A E P R G+Q + +P P P +
Sbjct: 1029 AGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGD 1088
Query: 197 SGRLRSSGLRGGTG 210
G + G +G G
Sbjct: 1089 KGEIGEPGQKGSKG 1102
Score = 37.4 bits (85), Expect = 0.011
Identities = 51/189 (26%), Positives = 66/189 (34%), Gaps = 22/189 (11%)
Query: 24 GRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPP--RGVPRPSRRPLAHPLPCESV 81
G+ P G + GSRG + KP GP G + G PP RG P
Sbjct: 841 GQRGPTGPR-GSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQ------------- 885
Query: 82 SPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSE 141
P +P GP G P + P T G G + +GP GE+
Sbjct: 886 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP-TGET---GP 941
Query: 142 SGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLR 201
G R +P P P E P +A + PG Q P + P G
Sbjct: 942 IGERGHPGPPGPPG-EQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG 1000
Query: 202 SSGLRGGTG 210
+ GL+GG G
Sbjct: 1001 APGLKGGEG 1009
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 38.5 bits (88), Expect = 0.005
Identities = 50/194 (25%), Positives = 65/194 (33%), Gaps = 18/194 (9%)
Query: 34 GSRGGARWSSK--PRGPGGAAA--GSESQSPP---RGVPRPSRRPLAHPLPCES------ 80
G RG + K P GPGG G ++ P RG P P P LP +
Sbjct: 949 GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK 1008
Query: 81 --VSPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRL 138
P GP+GL + LP A+ GG G + G ERG +
Sbjct: 1009 GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG-ERGSAGT 1067
Query: 139 RSESG--SRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETA 196
G R P P A E P R G+Q + +P P P +
Sbjct: 1068 AGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGD 1127
Query: 197 SGRLRSSGLRGGTG 210
G + G +G G
Sbjct: 1128 KGEIGEPGQKGSKG 1141
Score = 37.4 bits (85), Expect = 0.011
Identities = 51/189 (26%), Positives = 66/189 (34%), Gaps = 22/189 (11%)
Query: 24 GRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPP--RGVPRPSRRPLAHPLPCESV 81
G+ P G + GSRG + KP GP G + G PP RG P
Sbjct: 880 GQRGPTGPR-GSRGARGPTGKP-GPKGTSGGDGPPGPPGERGPQGPQ------------- 924
Query: 82 SPCAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSE 141
P +P GP G P + P T G G + +GP GE+
Sbjct: 925 GPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP-TGET---GP 980
Query: 142 SGSRENPPSPLPAALESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLR 201
G R +P P P E P +A + PG Q P + P G
Sbjct: 981 IGERGHPGPPGPPG-EQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG 1039
Query: 202 SSGLRGGTG 210
+ GL+GG G
Sbjct: 1040 APGLKGGEG 1048
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 16 PCSAASRSGRSRPAGNKCGSRGGAR-WSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH 74
P A GR +P G R G R W +P PG A + ++P VP + RP A
Sbjct: 47 PPGAPGALGRPKPVSR--GPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTAT 104
Query: 75 PLP--CESVSPCAWPACFGPS-GLPQRWPKGRLPSAEQVT 111
P P C P + PS G P + R P + T
Sbjct: 105 PAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGT 144
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 16 PCSAASRSGRSRPAGNKCGSRGGAR-WSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH 74
P A GR +P G R G R W +P PG A + ++P VP + RP A
Sbjct: 47 PPGAPGALGRPKPVSR--GPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTAT 104
Query: 75 PLP--CESVSPCAWPACFGPS-GLPQRWPKGRLPSAEQVT 111
P P C P + PS G P + R P + T
Sbjct: 105 PAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGT 144
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 16 PCSAASRSGRSRPAGNKCGSRGGAR-WSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH 74
P A GR +P G R G R W +P PG A + ++P VP + RP A
Sbjct: 47 PPGAPGALGRPKPVSR--GPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPGSASRPTAT 104
Query: 75 PLP--CESVSPCAWPACFGPS-GLPQRWPKGRLPSAEQVT 111
P P C P + PS G P + R P + T
Sbjct: 105 PAPPRCSRRPPTTTVSRVAPSPGRPAGLHRSREPRPQDGT 144
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 38.5 bits (88), Expect = 0.005
Identities = 42/154 (27%), Positives = 56/154 (36%), Gaps = 13/154 (8%)
Query: 48 PGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGP-SGLPQRWPKGRLPS 106
P G QSPPR P + P P +P A P F P G P P S
Sbjct: 410 PAAMLNGEGLQSPPRAQSAPPEAAVLPPSPLP--APVASPRPFQPGGGAPTPAPSIFNRS 467
Query: 107 AEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGS-----RENPPSPLP---AALES 158
A T G T ++ R P+R L S + P+PLP + + S
Sbjct: 468 ARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPS 527
Query: 159 QKPNSAQLSVWRARPGLQA--QIHVPTPEHTQTP 190
P S S R+ + A +++P P TP
Sbjct: 528 HAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTP 561
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 38.5 bits (88), Expect = 0.005
Identities = 42/154 (27%), Positives = 56/154 (36%), Gaps = 13/154 (8%)
Query: 48 PGGAAAGSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGP-SGLPQRWPKGRLPS 106
P G QSPPR P + P P +P A P F P G P P S
Sbjct: 186 PAAMLNGEGLQSPPRAQSAPPEAAVLPPSPLP--APVASPRPFQPGGGAPTPAPSIFNRS 243
Query: 107 AEQVTNHFGGHGIDTAALEIRDKGPERGESRLRSESGS-----RENPPSPLP---AALES 158
A T G T ++ R P+R L S + P+PLP + + S
Sbjct: 244 ARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPS 303
Query: 159 QKPNSAQLSVWRARPGLQA--QIHVPTPEHTQTP 190
P S S R+ + A +++P P TP
Sbjct: 304 HAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTP 337
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 38.1 bits (87), Expect = 0.006
Identities = 53/198 (26%), Positives = 69/198 (34%), Gaps = 27/198 (13%)
Query: 43 SKPRGPGGA-----AAGSESQSPPRGVPRPSRRPLAHPLPCESVSPCAWPACFGPSGLPQ 97
++ RG GG +A S + R +P PSR P P S P G SGL Q
Sbjct: 257 TRARGHGGVQRQRFSAPSSHSTGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQ 316
Query: 98 RWPKGRLPSAEQVTNHFGGHGIDT--AALEIRDKGPERGESRLRSESGSRENPPSPLPAA 155
GR VT+ G H + T + R G RG R S P P+
Sbjct: 317 LVGSGR---GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSV 373
Query: 156 ------LESQKPNSAQLSVWRARPGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGGT 209
L + + + Q A PG+ + P+P H G R G GG+
Sbjct: 374 RAFGPRLGAGRLSCPQAPRAAALPGI--AVLAPSPAHDW---------GGQRCEGCGGGS 422
Query: 210 GAGAASRGNRTVVTGNVP 227
A R R VP
Sbjct: 423 QPFAGRRAERGKRGAGVP 440
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 37.7 bits (86), Expect = 0.008
Identities = 62/225 (27%), Positives = 80/225 (35%), Gaps = 45/225 (20%)
Query: 3 GRGLGQASRIVGSPCSAASRSGRSRPAGNKCGSRGGARWSSKPRGPGGAAAGSESQSPPR 62
GRG G+ R+V +P SAA+ GR S P PG S + PR
Sbjct: 144 GRGGGRTRRVVAAPESAAAAPGR----------------SPSPADPGST---SSATRVPR 184
Query: 63 GVPRPSRRPL--AHPLPCESVSPCAWPACFGPSGLPQRWPKGRLPSAEQVTN-----HFG 115
R SRR L H P +P + P P R+P R P A ++ + G
Sbjct: 185 -ARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAP-RFPASRRPGAPRLLSRTRQRELG 242
Query: 116 GHGIDTAALEIRDKGPERGESRLRSESG--SRENPPSPLPA-ALESQKPNSAQLSVWRAR 172
G + A G+ L E G S + PP L A E P +L
Sbjct: 243 GSAAPSVAFS--------GDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRL------ 288
Query: 173 PGLQAQIHVPTPEHTQTPPESETASGRLRSSGLRGGTGAGAASRG 217
P + Q H P P L RGGTG+ + RG
Sbjct: 289 PDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRG 333
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,306,770
Number of Sequences: 37866
Number of extensions: 816626
Number of successful extensions: 6054
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 638
Number of HSP's that attempted gapping in prelim test: 5121
Number of HSP's gapped (non-prelim): 1511
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.