LOC100288645 17603

Name: LOC100288645	Sequence: fasta or formatted (585aa)		NCBI GI: 239743383
Description: PREDICTED: hypothetical protein XP_002342846		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 40 2 C cysteine 2.1 12 2 D aspartate 2.1 12 1 E glutamate 4.8 28 3 F phenylalanine 4.1 24 2 G glycine 12.8 75 4 H histidine 2.9 17 1 I isoleucine 2.1 12 1 K lysine 2.9 17 2 L leucine 9.4 55 2 M methionine 0.5 3 1 N asparagine 2.1 12 2 P proline 12.0 70 2 Q glutamine 4.8 28 3 R arginine 9.4 55 4 S serine 10.4 61 2 T threonine 3.4 20 2 V valine 4.8 28 2 W tryptophan 1.9 11 2 Y tyrosine 0.9 5 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342846 LOC100290274 1.000 PREDICTED: hypothetical protein XP_002346984 LOC100293191 0.081 PREDICTED: hypothetical protein LOC100290214 0.081 PREDICTED: hypothetical protein XP_002346983 LOC100288576 0.081 PREDICTED: hypothetical protein XP_002342845 LOC100288576 0.081 PREDICTED: hypothetical protein LOC100293166 0.078 PREDICTED: similar to ribosomal protein L36a LOC100290185 0.078 PREDICTED: hypothetical protein XP_002346982 LOC100288541 0.078 PREDICTED: hypothetical protein XP_002342844 LOC100288541 0.078 PREDICTED: similar to ribosomal protein L36a TAF4 0.028 TBP-associated factor 4 COL1A1 0.027 alpha 1 type I collagen preproprotein SAMD1 0.026 sterile alpha motif domain containing 1 COL1A2 0.025 alpha 2 type I collagen COL3A1 0.025 collagen type III alpha 1 preproprotein COL2A1 0.024 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.024 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.023 alpha 1 type V collagen preproprotein LOC100291624 0.023 PREDICTED: hypothetical protein XP_002345876 LOC100289712 0.023 PREDICTED: hypothetical protein XP_002346761 LOC100287455 0.023 PREDICTED: hypothetical protein XP_002342583 COL11A1 0.023 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.023 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.023 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100130360 0.022 PREDICTED: hypothetical protein LOC100290372 0.021 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.021 PREDICTED: hypothetical protein XP_002342652 MLL2 0.021 myeloid/lymphoid or mixed-lineage leukemia 2 OGFR 0.020 opioid growth factor receptor SYN1 0.020 synapsin I isoform Ia Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.