HLA-DQA2 824

Name: HLA-DQA2	Sequence: fasta or formatted (255aa)		NCBI GI: 11095447
Description: major histocompatibility complex, class II, DQ alpha 2		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 14 2 C cysteine 1.6 4 1 D aspartate 4.3 11 1 E glutamate 7.1 18 2 F phenylalanine 5.9 15 2 G glycine 7.5 19 2 H histidine 3.5 9 1 I isoleucine 4.7 12 2 K lysine 3.5 9 1 L leucine 11.0 28 3 M methionine 3.1 8 2 N asparagine 3.5 9 1 P proline 5.5 14 2 Q glutamine 3.1 8 1 R arginine 1.6 4 1 S serine 9.0 23 1 T threonine 6.7 17 1 V valine 9.0 23 2 W tryptophan 1.6 4 1 Y tyrosine 2.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class II, DQ alpha... LOC100294317 0.887 PREDICTED: similar to MHC HLA-DQ alpha HLA-DQA1 0.887 major histocompatibility complex, class II, DQ alpha... LOC731682 0.885 PREDICTED: similar to major histocompatibility comp... LOC100294224 0.883 PREDICTED: similar to MHC class II antigen LOC731682 0.879 PREDICTED: similar to major histocompatibility comp... LOC100294190 0.879 PREDICTED: similar to major histocompatibility comp... LOC100294162 0.879 PREDICTED: similar to major histocompatibility comp... LOC100294277 0.850 PREDICTED: similar to major histocompatibility comp... LOC100294114 0.850 PREDICTED: similar to major histocompatibility comp... HLA-DPA1 0.534 major histocompatibility complex, class II, DP alpha... HLA-DOA 0.518 major histocompatibility complex, class II, DO alpha ... LOC100133678 0.514 PREDICTED: similar to major histocompatibility comp... HLA-DRA 0.498 major histocompatibility complex, class II, DR alpha... LOC100133763 0.370 PREDICTED: similar to major histocompatibility comp... HLA-DMA 0.152 major histocompatibility complex, class II, DM alpha... HLA-DRB5 0.091 major histocompatibility complex, class II, DR beta ... LOC100294036 0.091 PREDICTED: similar to HLA class II histocompatibili... LOC100294468 0.091 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.091 PREDICTED: similar to HLA class II histocompatibili... LOC100294189 0.091 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.091 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.091 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.089 major histocompatibility complex, class II, DR beta ... LOC100293977 0.089 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.089 PREDICTED: major histocompatibility complex, class ... LOC100294275 0.089 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.089 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.089 PREDICTED: similar to major histocompatibility comp... LOC100290966 0.089 PREDICTED: hypothetical protein XP_002346811 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.