LOC100133763 21263

Name: LOC100133763	Sequence: fasta or formatted (130aa)		NCBI GI: 239752547
Description: PREDICTED: similar to major histocompatibility complex, class II, DQ alpha 1, partial		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 9 2 C cysteine 1.5 2 1 D aspartate 4.6 6 1 E glutamate 4.6 6 1 F phenylalanine 4.6 6 1 G glycine 6.9 9 2 H histidine 2.3 3 1 I isoleucine 3.8 5 1 K lysine 3.8 5 1 L leucine 11.5 15 1 M methionine 2.3 3 1 N asparagine 6.2 8 1 P proline 5.4 7 1 Q glutamine 4.6 6 1 R arginine 3.1 4 1 S serine 6.9 9 1 T threonine 6.9 9 2 V valine 9.2 12 1 W tryptophan 0.8 1 1 Y tyrosine 3.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294277 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294114 1.000 PREDICTED: similar to major histocompatibility comp... LOC731682 0.900 PREDICTED: similar to major histocompatibility comp... LOC100294190 0.900 PREDICTED: similar to major histocompatibility comp... LOC100294162 0.900 PREDICTED: similar to major histocompatibility comp... LOC731682 0.896 PREDICTED: similar to major histocompatibility comp... LOC100294317 0.896 PREDICTED: similar to MHC HLA-DQ alpha LOC100294224 0.896 PREDICTED: similar to MHC class II antigen HLA-DQA1 0.792 major histocompatibility complex, class II, DQ alpha... HLA-DQA2 0.762 major histocompatibility complex, class II, DQ alpha... HLA-DPA1 0.417 major histocompatibility complex, class II, DP alpha... HLA-DOA 0.412 major histocompatibility complex, class II, DO alpha ... HLA-DRA 0.283 major histocompatibility complex, class II, DR alpha... LOC100133678 0.092 PREDICTED: similar to major histocompatibility comp... BBS7 0.013 Bardet-Biedl syndrome 7 protein isoform a BBS7 0.013 Bardet-Biedl syndrome 7 protein isoform b HLA-DMA 0.008 major histocompatibility complex, class II, DM alpha... CLCA1 0.008 chloride channel accessory 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.