LOC401097 7477

Name: LOC401097	Sequence: fasta or formatted (283aa)		NCBI GI: 169166115
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {283aa} PREDICTED: hypothetical protein alt prot {154aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 33 3 C cysteine 2.8 8 2 D aspartate 4.2 12 5 E glutamate 6.4 18 2 F phenylalanine 2.1 6 1 G glycine 13.1 37 4 H histidine 1.1 3 1 I isoleucine 1.8 5 2 K lysine 1.4 4 1 L leucine 11.0 31 2 M methionine 1.4 4 1 N asparagine 0.7 2 1 P proline 11.0 31 2 Q glutamine 2.8 8 2 R arginine 10.6 30 2 S serine 8.1 23 3 T threonine 1.4 4 1 V valine 5.7 16 2 W tryptophan 0.7 2 1 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC401097 1.000 PREDICTED: hypothetical protein LOC401097 0.110 PREDICTED: hypothetical protein C1QL2 0.031 complement component 1, q subcomponent-like 2 [Homo... CLIC6 0.027 chloride intracellular channel 6 LOC283999 0.027 hypothetical protein LOC283999 COL9A3 0.027 alpha 3 type IX collagen NOVA2 0.025 neuro-oncological ventral antigen 2 IRX5 0.024 iroquois homeobox protein 5 AEBP2 0.024 AE binding protein 2 isoform b AEBP2 0.024 AE binding protein 2 isoform a GDF7 0.022 growth differentiation factor 7 preproprotein COL11A1 0.022 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.022 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.022 alpha 1 type XI collagen isoform A preproprotein [Ho... MAP3K12 0.022 mitogen-activated protein kinase kinase kinase 12 [H... TWIST1 0.022 twist LOC730236 0.020 PREDICTED: hypothetical protein LOC730236 0.020 PREDICTED: hypothetical protein COL4A4 0.020 alpha 4 type IV collagen precursor COL1A1 0.020 alpha 1 type I collagen preproprotein CEBPA 0.018 CCAAT/enhancer binding protein alpha COL5A1 0.018 alpha 1 type V collagen preproprotein PRR12 0.018 proline rich 12 XYLT1 0.018 xylosyltransferase I FOXC1 0.018 forkhead box C1 ZFP36L2 0.018 zinc finger protein 36, C3H type-like 2 COL5A2 0.018 alpha 2 type V collagen preproprotein LOC285556 0.018 PREDICTED: hypothetical protein LOC285556 NKX1-1 0.018 PREDICTED: NK1 homeobox 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.