Guide to the Human Genome
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Name: AEBP2 Sequence: fasta or formatted (517aa) NCBI GI: 166795264
Description:

AE binding protein 2 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [503aa] AE binding protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         34           3
 C cysteine            1.7          9           2
 D aspartate           5.6         29           2
 E glutamate           9.7         50          12
 F phenylalanine       1.9         10           2
 G glycine            12.8         66          10
 H histidine           2.7         14           1
 I isoleucine          2.9         15           1
 K lysine              5.4         28           1
 L leucine             7.0         36           3
 M methionine          2.3         12           2
 N asparagine          2.7         14           1
 P proline             5.0         26           2
 Q glutamine           3.1         16           2
 R arginine            5.2         27           3
 S serine             15.3         79           5
 T threonine           3.9         20           2
 V valine              4.3         22           2
 W tryptophan          1.0          5           1
 Y tyrosine            1.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AE binding protein 2 isoform b 
AEBP2                 0.973   AE binding protein 2 isoform a 
GLI1                  0.055   GLI family zinc finger 1 isoform 1 
GLI1                  0.054   GLI family zinc finger 1 isoform 2 
GLIS3                 0.050   GLIS family zinc finger 3 isoform a 
GLIS3                 0.050   GLIS family zinc finger 3 isoform b 
GLIS1                 0.047   GLIS family zinc finger 1 
BHLHE22               0.046   basic helix-loop-helix domain containing, class B, 5...
KRT10                 0.046   keratin 10 
RREB1                 0.045   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.045   ras responsive element binding protein 1 isoform 1 [...
GLI2                  0.044   GLI-Kruppel family member GLI2 
GLI3                  0.044   GLI-Kruppel family member GLI3 
RPGR                  0.043   retinitis pigmentosa GTPase regulator isoform C [Hom...
TNRC18                0.043   trinucleotide repeat containing 18 
DSPP                  0.039   dentin sialophosphoprotein preproprotein 
KRT9                  0.039   keratin 9 
LOR                   0.039   loricrin 
SP8                   0.038   Sp8 transcription factor isoform 1 
SP8                   0.038   Sp8 transcription factor isoform 2 
GLIS2                 0.038   GLIS family zinc finger 2 
ZBTB37                0.036   zinc finger and BTB domain containing 37 isoform a ...
FUS                   0.036   fusion (involved in t(12;16) in malignant liposarcoma...
CLIC6                 0.035   chloride intracellular channel 6 
ARID3A                0.034   AT rich interactive domain 3A (BRIGHT- like) protein ...
ZIC5                  0.034   zinc finger protein of the cerebellum 5 
ZIC2                  0.033   zinc finger protein of the cerebellum 2 
DMKN                  0.033   dermokine isoform 5 precursor 
ZIC4                  0.033   zinc finger protein of the cerebellum 4 
IBSP                  0.033   integrin-binding sialoprotein precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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