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Search of human proteins with 16905373
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16905373 beta-defensin 118 [Homo sapiens]
(123 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16905373 beta-defensin 118 [Homo sapiens] 257 2e-69
gi|239757478 PREDICTED: defensin, beta 117 [Homo sapiens] 59 1e-09
gi|239751980 PREDICTED: defensin, beta 117 [Homo sapiens] 59 1e-09
gi|239746467 PREDICTED: defensin, beta 117 [Homo sapiens] 59 1e-09
gi|58865339 defensin, beta 121 [Homo sapiens] 54 3e-08
gi|23503331 defensin, beta 123 precursor [Homo sapiens] 54 4e-08
gi|83582798 beta-defensin 115 [Homo sapiens] 51 3e-07
gi|46409558 beta-defensin 32 precursor [Homo sapiens] 49 7e-07
gi|83582802 beta-defensin 128 [Homo sapiens] 49 1e-06
gi|23503329 defensin, beta 119 isoform c precursor [Homo sapiens] 49 1e-06
gi|76563936 defensin, beta 125 preproprotein [Homo sapiens] 48 2e-06
gi|13624333 defensin, beta 126 preproprotein [Homo sapiens] 44 4e-05
gi|21040279 defensin, beta 127 preproprotein [Homo sapiens] 43 5e-05
gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens] 43 5e-05
gi|169166494 PREDICTED: hypothetical protein [Homo sapiens] 40 4e-04
gi|116517226 beta-defensin 135 [Homo sapiens] 39 0.001
gi|239753808 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|239748372 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|50344744 beta-defensin 108B [Homo sapiens] 39 0.001
gi|82734223 beta-defensin 124 [Homo sapiens] 38 0.002
gi|103485139 defensin, beta 104A precursor [Homo sapiens] 36 0.008
gi|103485137 defensin, beta 104B precursor [Homo sapiens] 36 0.008
gi|18250304 beta defensin 129 precursor [Homo sapiens] 34 0.024
gi|83582800 beta-defensin 116 [Homo sapiens] 33 0.054
gi|74136827 beta-defensin 134 [Homo sapiens] 31 0.21
gi|239743495 PREDICTED: hypothetical protein XP_002342880 [Homo ... 31 0.27
gi|169173154 PREDICTED: hypothetical protein [Homo sapiens] 30 0.35
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap... 30 0.35
gi|169172390 PREDICTED: similar to defensin, beta 131 [Homo sapi... 30 0.35
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 30 0.35
>gi|16905373 beta-defensin 118 [Homo sapiens]
Length = 123
Score = 257 bits (656), Expect = 2e-69
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNE 60
MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNE
Sbjct: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNE 60
Query: 61 DHRRVPATSPTPLSDSTPGIIDDILTVRFTTDYFEVSSKKDMVEESEAGRGTETSLPNVH 120
DHRRVPATSPTPLSDSTPGIIDDILTVRFTTDYFEVSSKKDMVEESEAGRGTETSLPNVH
Sbjct: 61 DHRRVPATSPTPLSDSTPGIIDDILTVRFTTDYFEVSSKKDMVEESEAGRGTETSLPNVH 120
Query: 121 HSS 123
HSS
Sbjct: 121 HSS 123
>gi|239757478 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 58.5 bits (140), Expect = 1e-09
Identities = 24/38 (63%), Positives = 25/38 (65%)
Query: 24 EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNED 61
+K CW GHCRK CK GE VK CKN CCIPSN D
Sbjct: 15 QKSCWIIKGHCRKNCKPGEQVKKPCKNGDYCCIPSNTD 52
>gi|239751980 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 58.5 bits (140), Expect = 1e-09
Identities = 24/38 (63%), Positives = 25/38 (65%)
Query: 24 EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNED 61
+K CW GHCRK CK GE VK CKN CCIPSN D
Sbjct: 15 QKSCWIIKGHCRKNCKPGEQVKKPCKNGDYCCIPSNTD 52
>gi|239746467 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 58.5 bits (140), Expect = 1e-09
Identities = 24/38 (63%), Positives = 25/38 (65%)
Query: 24 EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNED 61
+K CW GHCRK CK GE VK CKN CCIPSN D
Sbjct: 15 QKSCWIIKGHCRKNCKPGEQVKKPCKNGDYCCIPSNTD 52
>gi|58865339 defensin, beta 121 [Homo sapiens]
Length = 76
Score = 53.9 bits (128), Expect = 3e-08
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
MKLLLL L + +LL QV P KCW +SG CR CK+ E CK CC+
Sbjct: 1 MKLLLLLLTVTLLLAQVTPVM----KCWGKSGRCRTTCKESEVYYILCKTEAKCCV 52
>gi|23503331 defensin, beta 123 precursor [Homo sapiens]
Length = 67
Score = 53.5 bits (127), Expect = 4e-08
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
MKLLLL L +L+LL Q+ P G ++CWN G CR +C E V C N + CC+
Sbjct: 1 MKLLLLTLTVLLLLSQLTPG--GTQRCWNLYGKCRYRCSKKERVYVYCINNKMCCV 54
>gi|83582798 beta-defensin 115 [Homo sapiens]
Length = 88
Score = 50.8 bits (120), Expect = 3e-07
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSNE 60
+KL +LAL +LV+L Q P ++C+ +G CRK CK+ E K+ C CC+P +
Sbjct: 13 IKLSVLALVVLVVLAQTAPD-GWIRRCYYGTGRCRKSCKEIERKKEKCGEKHICCVPKEK 71
Query: 61 D 61
D
Sbjct: 72 D 72
>gi|46409558 beta-defensin 32 precursor [Homo sapiens]
Length = 95
Score = 49.3 bits (116), Expect = 7e-07
Identities = 28/57 (49%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCW-NRSGHCRKQCKDGEAVKDTCKNLRACCI 56
MK LLL L L L QVIPA +G KC N G+CR C GE C R CCI
Sbjct: 1 MKFLLLVLAALGFLTQVIPASAGGSKCVSNTPGYCRTCCHWGETALFMCNASRKCCI 57
>gi|83582802 beta-defensin 128 [Homo sapiens]
Length = 93
Score = 48.9 bits (115), Expect = 1e-06
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNR-SGHCRKQCKDGEAVKDTCKNLRACCIPSN 59
MKL L+ +++LL +V+ + KKC+N+ +G+CRK+CK GE + C + + CC
Sbjct: 1 MKLFLV---LIILLFEVLTDGARLKKCFNKVTGYCRKKCKVGERYEIGCLSGKLCCANDE 57
Query: 60 EDHRRVPATSPTPLSDSTPGIIDDIL 85
E+ + V P S ++ D +
Sbjct: 58 EEKKHVSFKKPHQHSGEKLSVLQDYI 83
>gi|23503329 defensin, beta 119 isoform c precursor [Homo sapiens]
Length = 88
Score = 48.9 bits (115), Expect = 1e-06
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCIPS 58
MKLL L L +L+ + + P S E CW GHCR CKDGE C+N + CC+PS
Sbjct: 1 MKLLYLFLAILLAIEE--PVISVE--CW-MDGHCRLLCKDGEDSIIRCRNRKRCCVPS 53
>gi|76563936 defensin, beta 125 preproprotein [Homo sapiens]
Length = 156
Score = 47.8 bits (112), Expect = 2e-06
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCW-NRSGHCRKQCKDGEAVKDTCKNLRACCIP-S 58
M +L+L + LL +V +KCW N GHCR++C D E C+N +CCI
Sbjct: 1 MNILMLTFIICGLLTRVTKGSFEPQKCWKNNVGHCRRRCLDTERYILLCRNKLSCCISII 60
Query: 59 NEDHRRVPATSPTPLSDST 77
+ ++ R PA L D T
Sbjct: 61 SHEYTRRPAFPVIHLEDIT 79
>gi|13624333 defensin, beta 126 preproprotein [Homo sapiens]
Length = 111
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEA-VKD---TCKNLRACCI 56
MK LL L + +LL Q++ KKC N G C+K+CK E VK+ C R CC+
Sbjct: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
Query: 57 PSN 59
P++
Sbjct: 61 PAD 63
>gi|21040279 defensin, beta 127 preproprotein [Homo sapiens]
Length = 99
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 25 KKCWNR--SGHCRKQCKDGEAVKDTCKNLRACCIPSNEDHRRVPATSPTPLSDSTPGI-I 81
KKCWN GHCRK C+ E + C+N R CC+ E T P +T + +
Sbjct: 22 KKCWNNYVQGHCRKICRVNEVPEALCENGRYCCLNIKELEACKKITKPPRPKPATLALTL 81
Query: 82 DDILTV 87
D +T+
Sbjct: 82 QDYVTI 87
>gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens]
Length = 84
Score = 43.1 bits (100), Expect = 5e-05
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEK---KCWNRSGHCRKQCKDGEAVKDTCKNLRACCIP 57
MKLL L L +L+ + + P SG++ +C SG CR CK E C+N ++CC+
Sbjct: 1 MKLLYLFLAILLAIEE--PVISGKRHILRCMGNSGICRASCKKNEQPYLYCRNCQSCCLQ 58
Query: 58 S 58
S
Sbjct: 59 S 59
>gi|169166494 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 40.0 bits (92), Expect = 4e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKK-CWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSN 59
M++ +L + + QV+PA K+ C +G CR C + E C N R CC+P
Sbjct: 1 MRIAVLLFAIFFFMSQVLPARGKFKEICERPNGSCRDFCLETEIHVGRCLNSRPCCLPLG 60
Query: 60 EDHRRVPATSP 70
R+ +T+P
Sbjct: 61 H-QPRIESTTP 70
>gi|116517226 beta-defensin 135 [Homo sapiens]
Length = 77
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 4 LLLALPMLVLLPQVIPAYSGEK--------KCWNRSGHCRKQCKDGEAVKDTCKNLRACC 55
+LLAL +L LL V P SG CW G CR +C E + C + CC
Sbjct: 6 VLLALVVLNLLFYVPPGRSGPNVYIQKIFASCWRLQGTCRPKCLKNEQYRILCDTIHLCC 65
Query: 56 I 56
+
Sbjct: 66 V 66
>gi|239753808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKK-CWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSN 59
+++ +L + + QV+PA K+ C +G CR C + E C N R CC+P
Sbjct: 11 VRIAVLLFAIFFFMSQVLPARGKFKEICERPNGSCRDFCLETEIHVGRCLNSRPCCLPLG 70
Query: 60 EDHRRVPATSP 70
R+ +T+P
Sbjct: 71 H-QPRIESTTP 80
>gi|239748372 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKK-CWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSN 59
+++ +L + + QV+PA K+ C +G CR C + E C N R CC+P
Sbjct: 11 VRIAVLLFAIFFFMSQVLPARGKFKEICERPNGSCRDFCLETEIHVGRCLNSRPCCLPLG 70
Query: 60 EDHRRVPATSP 70
R+ +T+P
Sbjct: 71 H-QPRIESTTP 80
>gi|50344744 beta-defensin 108B [Homo sapiens]
Length = 73
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKK-CWNRSGHCRKQCKDGEAVKDTCKNLRACCIPSN 59
M++ +L + + QV+PA K+ C +G CR C + E C N + CC+P
Sbjct: 1 MRIAVLLFAIFFFMSQVLPARGKFKEICERPNGSCRDFCLETEIHVGRCLNSQPCCLPLG 60
Query: 60 EDHRRVPATSP 70
R+ +T+P
Sbjct: 61 H-QPRIESTTP 70
>gi|82734223 beta-defensin 124 [Homo sapiens]
Length = 71
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
M LLL L L++L V S K+CW G C+ C E C + CC+
Sbjct: 1 MTQLLLFLVALLVLGHVPSGRSEFKRCWKGQGACQTYCTRQETYMHLCPDASLCCL 56
>gi|103485139 defensin, beta 104A precursor [Homo sapiens]
Length = 72
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSG---EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
M+ L+L L + +LL Q +P S ++ C + CRK+C+ E C N ACC+
Sbjct: 1 MQRLVLLLAISLLLYQDLPVRSEFELDRICGYGTARCRKKCRSQEYRIGRCPNTYACCL 59
>gi|103485137 defensin, beta 104B precursor [Homo sapiens]
Length = 72
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSG---EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
M+ L+L L + +LL Q +P S ++ C + CRK+C+ E C N ACC+
Sbjct: 1 MQRLVLLLAISLLLYQDLPVRSEFELDRICGYGTARCRKKCRSQEYRIGRCPNTYACCL 59
>gi|18250304 beta defensin 129 precursor [Homo sapiens]
Length = 183
Score = 34.3 bits (77), Expect = 0.024
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCI 56
MKLL L+L QV + G ++C G CR C E CK ++ CC+
Sbjct: 1 MKLLFPIFASLMLQYQVNTEFIGLRRCLMGLGRCRDHCNVDEKEIQKCK-MKKCCV 55
>gi|83582800 beta-defensin 116 [Homo sapiens]
Length = 102
Score = 33.1 bits (74), Expect = 0.054
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 1 MKLLLLALPMLVLLPQVIP-----AYSGE-KKCWNR----SGHCRKQCKDGEAVKDTCKN 50
MK L+ + +L++L Q P +++G+ ++ WN G CR C++ E TC N
Sbjct: 4 MKPCLMTIAILMILAQKTPGGLFRSHNGKSREPWNPCELYQGMCRNACREYEIQYLTCPN 63
Query: 51 LRACCI 56
+ CC+
Sbjct: 64 DQKCCL 69
>gi|74136827 beta-defensin 134 [Homo sapiens]
Length = 66
Score = 31.2 bits (69), Expect = 0.21
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 1 MKLLLLALPMLVLLPQVIPAYSG-----EKKCWNRSGHCRKQCKDGEAVKDTCKNLRACC 55
MK LL+ L L V+ + KKC+ ++G CR +C + E + C CC
Sbjct: 1 MKPLLVVFVFLFLWDPVLAGINSLSSEMHKKCY-KNGICRLECYESEMLVAYCMFQLECC 59
Query: 56 IPSN 59
+ N
Sbjct: 60 VKGN 63
>gi|239743495 PREDICTED: hypothetical protein XP_002342880 [Homo
sapiens]
Length = 70
Score = 30.8 bits (68), Expect = 0.27
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 1 MKLLLLALPMLVLLPQVIPAYS--GEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACC 55
M++L +L L+ V PA S +C + HCR +C E V C CC
Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHVIRYCAYFSICC 57
>gi|169173154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 30.4 bits (67), Expect = 0.35
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 1 MKLLLLALPMLVLLPQVIPAYS--GEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACC 55
M++L +L L+ V PA S +C + HCR +C E C + CC
Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHAIRYCADFSICC 57
>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
sapiens]
Length = 514
Score = 30.4 bits (67), Expect = 0.35
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 65 VPATSPTPLSDSTPGIIDDILTVRFTTDYFEVSSKKDM----VEESEAGRGTETS 115
+P T+PT ++ + G + +LT T F VSS M + S + + TETS
Sbjct: 237 IPLTTPTTITHHSVGSTESLLTATDLTSTFTVSSSSAMSTSDIPSSPSIQNTETS 291
>gi|169172390 PREDICTED: similar to defensin, beta 131 [Homo
sapiens]
Length = 70
Score = 30.4 bits (67), Expect = 0.35
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 1 MKLLLLALPMLVLLPQVIPAYS--GEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACC 55
M++L +L L+ V PA S +C + HCR +C E C + CC
Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHAIRYCADFSICC 57
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 30.4 bits (67), Expect = 0.35
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 31 SGHCRKQCKDGEAVKDTCKNLRACCIPSNEDHRRVPATSPTPLSDSTPGIIDDILTVRFT 90
SG R++ + K+ K L I S+ D + A + SDS P + D+ +
Sbjct: 1544 SGSSRQESPSVPSCKENEKKLNGEKIESSIDEQVQTAADDSLRSDSVPSLPDEKDSTSIA 1603
Query: 91 TDY---FEVSSKKDMVEE 105
T+Y F+ S +D +EE
Sbjct: 1604 TEYSLKFDESMTEDEIEE 1621
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,264,650
Number of Sequences: 37866
Number of extensions: 238398
Number of successful extensions: 832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 780
Number of HSP's gapped (non-prelim): 73
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.