Guide to the Human Genome
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Name: CEP350 Sequence: fasta or formatted (3117aa) NCBI GI: 171184451
Description:

centrosome-associated protein 350

Referenced in:

Centrosome
Dynein and Dynactin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7        178           2
 C cysteine            0.9         28           1
 D aspartate           6.1        190           3
 E glutamate          10.5        327           3
 F phenylalanine       2.2         69           1
 G glycine             3.8        118           2
 H histidine           2.6         81           2
 I isoleucine          4.0        126           2
 K lysine              9.3        291           2
 L leucine             8.8        274           3
 M methionine          1.5         48           2
 N asparagine          3.3        104           3
 P proline             5.0        156           2
 Q glutamine           5.7        178           3
 R arginine            5.5        172           2
 S serine             12.9        403           4
 T threonine           5.2        163           3
 V valine              4.4        138           2
 W tryptophan          0.8         25           1
 Y tyrosine            1.5         48           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosome-associated protein 350 
GOLGA4                0.013   golgi autoantigen, golgin subfamily a, 4 
CLIP1                 0.012   restin isoform b 
CLIP1                 0.012   restin isoform a 
CLIP2                 0.012   CAP-GLY domain containing linker protein 2 isoform ...
CLIP2                 0.012   CAP-GLY domain containing linker protein 2 isoform 2...
CLIP4                 0.011   CAP-GLY domain containing linker protein family, mem...
PLEC1                 0.011   plectin 1 isoform 11 
PLEC1                 0.011   plectin 1 isoform 10 
PLEC1                 0.011   plectin 1 isoform 8 
PLEC1                 0.011   plectin 1 isoform 7 
PLEC1                 0.011   plectin 1 isoform 6 
PLEC1                 0.011   plectin 1 isoform 3 
PLEC1                 0.011   plectin 1 isoform 2 
PLEC1                 0.011   plectin 1 isoform 1 
EEA1                  0.011   early endosome antigen 1, 162kD 
CLIP3                 0.011   CAP-GLY domain containing linker protein 3 
TCHH                  0.010   trichohyalin 
GOLGB1                0.010   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPE                 0.010   centromere protein E 
CENPF                 0.010   centromere protein F 
MYO18A                0.009   myosin 18A isoform b 
MYO18A                0.009   myosin 18A isoform a 
ATRX                  0.009   transcriptional regulator ATRX isoform 2 
ATRX                  0.009   transcriptional regulator ATRX isoform 1 
GOLGA3                0.009   Golgi autoantigen, golgin subfamily a, 3 
KTN1                  0.009   kinectin 1 isoform a 
KTN1                  0.009   kinectin 1 isoform a 
NUMA1                 0.009   nuclear mitotic apparatus protein 1 
CEP250                0.009   centrosomal protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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