Search of human proteins with 110618238

Search of human proteins with 110618238

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110618238 CD1E antigen isoform f precursor [Homo sapiens]
         (101 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110618238 CD1E antigen isoform f precursor [Homo sapiens]          231   9e-62
gi|110618232 CD1E antigen isoform c precursor [Homo sapiens]          191   8e-50
gi|110618236 CD1E antigen isoform e precursor [Homo sapiens]          177   2e-45
gi|110618240 CD1E antigen isoform a precursor [Homo sapiens]          137   1e-33
gi|110618230 CD1E antigen isoform b precursor [Homo sapiens]          137   1e-33
gi|110618224 CD1A antigen precursor [Homo sapiens]                    124   1e-29
gi|4502645 CD1B antigen precursor [Homo sapiens]                      124   2e-29
gi|4502649 CD1D antigen precursor [Homo sapiens]                      122   8e-29
gi|110618227 CD1C antigen precursor [Homo sapiens]                    103   4e-23
gi|110618234 CD1E antigen isoform d precursor [Homo sapiens]           94   2e-20
gi|4504417 major histocompatibility complex, class I-related [Ho...    42   1e-04
gi|17986005 major histocompatibility complex, class II, DR beta ...    38   0.002
gi|239758092 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239748785 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239740855 PREDICTED: similar to major histocompatibility comp...    38   0.002
gi|239740853 PREDICTED: similar to major histocompatibility comp...    38   0.002
gi|239740745 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239740743 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239740695 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239740693 PREDICTED: similar to HLA class II histocompatibili...    38   0.002
gi|239748820 PREDICTED: hypothetical protein XP_002346811 [Homo ...    37   0.003
gi|239740859 PREDICTED: similar to major histocompatibility comp...    37   0.003
gi|239740857 PREDICTED: similar to major histocompatibility comp...    37   0.003
gi|24797076 major histocompatibility complex, class II, DP beta ...    37   0.003
gi|52630344 major histocompatibility complex, class II, DR beta ...    37   0.004
gi|239758090 PREDICTED: major histocompatibility complex, class ...    37   0.004
gi|169217452 PREDICTED: similar to HLA class II histocompatibili...    37   0.004
gi|155030211 major histocompatibility complex, class II, DR beta...    36   0.006
gi|18641375 major histocompatibility complex, class II, DR beta ...    36   0.006
gi|24797074 major histocompatibility complex, class II, DP alpha...    35   0.013

>gi|110618238 CD1E antigen isoform f precursor [Homo sapiens]
          Length = 101

 Score =  231 bits (589), Expect = 9e-62
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ 60
           MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ
Sbjct: 1   MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ 60

Query: 61  EQRGTQRGDVLPNADETWWIFHLSHPDLFDCDSYPGHIGCS 101
           EQRGTQRGDVLPNADETWWIFHLSHPDLFDCDSYPGHIGCS
Sbjct: 61  EQRGTQRGDVLPNADETWWIFHLSHPDLFDCDSYPGHIGCS 101


>gi|110618232 CD1E antigen isoform c precursor [Homo sapiens]
          Length = 290

 Score =  191 bits (486), Expect = 8e-50
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW
Sbjct: 209 VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 268

Query: 80  IFHLSHPDLFDCDSYPGHIGCS 101
           IFHLSHPDLFDCDSYPGHIGCS
Sbjct: 269 IFHLSHPDLFDCDSYPGHIGCS 290



 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 1/24 (4%)

Query: 1  MLLLFLLFEGLCCPGENTAVKPEA 24
          MLLLFLLFEGLCCPGENTA  P+A
Sbjct: 1  MLLLFLLFEGLCCPGENTAA-PQA 23


>gi|110618236 CD1E antigen isoform e precursor [Homo sapiens]
          Length = 187

 Score =  177 bits (449), Expect = 2e-45
 Identities = 78/80 (97%), Positives = 80/80 (100%)

Query: 1  MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ 60
          MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ
Sbjct: 1  MLLLFLLFEGLCCPGENTAVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQ 60

Query: 61 EQRGTQRGDVLPNADETWWI 80
          EQRGTQRGDVLPNADETW++
Sbjct: 61 EQRGTQRGDVLPNADETWYL 80


>gi|110618240 CD1E antigen isoform a precursor [Homo sapiens]
          Length = 388

 Score =  137 bits (346), Expect = 1e-33
 Identities = 59/61 (96%), Positives = 61/61 (100%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETW+
Sbjct: 209 VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWY 268

Query: 80  I 80
           +
Sbjct: 269 L 269



 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 1/24 (4%)

Query: 1  MLLLFLLFEGLCCPGENTAVKPEA 24
          MLLLFLLFEGLCCPGENTA  P+A
Sbjct: 1  MLLLFLLFEGLCCPGENTAA-PQA 23


>gi|110618230 CD1E antigen isoform b precursor [Homo sapiens]
          Length = 376

 Score =  137 bits (346), Expect = 1e-33
 Identities = 59/61 (96%), Positives = 61/61 (100%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETW+
Sbjct: 209 VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWY 268

Query: 80  I 80
           +
Sbjct: 269 L 269



 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 1/24 (4%)

Query: 1  MLLLFLLFEGLCCPGENTAVKPEA 24
          MLLLFLLFEGLCCPGENTA  P+A
Sbjct: 1  MLLLFLLFEGLCCPGENTAA-PQA 23


>gi|110618224 CD1A antigen precursor [Homo sapiens]
          Length = 327

 Score =  124 bits (312), Expect = 1e-29
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKPEAWLS GPSPGPG LQLVCHVSGFYPKPVWVMWMRGEQEQ+GTQRGD+LP+AD TW+
Sbjct: 202 VKPEAWLSHGPSPGPGHLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQRGDILPSADGTWY 261

Query: 80  I 80
           +
Sbjct: 262 L 262


>gi|4502645 CD1B antigen precursor [Homo sapiens]
          Length = 333

 Score =  124 bits (311), Expect = 2e-29
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKPEAWLS GPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQ+GTQ GD+LPNA+ TW+
Sbjct: 203 VKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNANWTWY 262

Query: 80  I 80
           +
Sbjct: 263 L 263


>gi|4502649 CD1D antigen precursor [Homo sapiens]
          Length = 335

 Score =  122 bits (305), Expect = 8e-29
 Identities = 52/61 (85%), Positives = 57/61 (93%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           VKP+AWLS GPSPGPGRL LVCHVSGFYPKPVWV WMRGEQEQ+GTQ GD+LPNADETW+
Sbjct: 203 VKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWY 262

Query: 80  I 80
           +
Sbjct: 263 L 263


>gi|110618227 CD1C antigen precursor [Homo sapiens]
          Length = 333

 Score =  103 bits (256), Expect = 4e-23
 Identities = 44/61 (72%), Positives = 50/61 (81%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADETWW 79
           V+PEAWLS  PS G G+L LVCH SGFYPKPVWV WMR EQEQ GT+ GD+LPNAD TW+
Sbjct: 204 VRPEAWLSSRPSLGSGQLLLVCHASGFYPKPVWVTWMRNEQEQLGTKHGDILPNADGTWY 263

Query: 80  I 80
           +
Sbjct: 264 L 264


>gi|110618234 CD1E antigen isoform d precursor [Homo sapiens]
          Length = 321

 Score = 94.0 bits (232), Expect = 2e-20
 Identities = 39/39 (100%), Positives = 39/39 (100%)

Query: 20  VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRG 58
           VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRG
Sbjct: 209 VKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRG 247



 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 1/24 (4%)

Query: 1  MLLLFLLFEGLCCPGENTAVKPEA 24
          MLLLFLLFEGLCCPGENTA  P+A
Sbjct: 1  MLLLFLLFEGLCCPGENTAA-PQA 23


>gi|4504417 major histocompatibility complex, class I-related [Homo
           sapiens]
          Length = 341

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 34  PGRLQLVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETWWIFHLSHPDLFDCD 92
           PG   L C   GFYP  +++ WM+ GE+  +    GD+LP+ D T+  +     D    +
Sbjct: 215 PGVTALFCKAHGFYPPEIYMTWMKNGEEIVQEIDYGDILPSGDGTYQAWASIELDPQSSN 274

Query: 93  SYPGHI 98
            Y  H+
Sbjct: 275 LYSCHV 280


>gi|17986005 major histocompatibility complex, class II, DR beta 3
           precursor [Homo sapiens]
          Length = 266

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239758092 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-7 beta chain [Homo sapiens]
          Length = 253

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 131 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 171


>gi|239748785 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-9 beta chain [Homo sapiens]
          Length = 266

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239740855 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 3 isoform 1 [Homo sapiens]
          Length = 267

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 145 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 185


>gi|239740853 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 3 isoform 2 [Homo sapiens]
          Length = 266

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239740745 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-7 beta chain isoform 1 [Homo sapiens]
          Length = 266

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239740743 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-7 beta chain isoform 2 [Homo sapiens]
          Length = 264

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 142 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 182


>gi|239740695 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-7 beta chain isoform 1 [Homo sapiens]
          Length = 266

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239740693 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-7 beta chain isoform 2 [Homo sapiens]
          Length = 264

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 142 LVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 182


>gi|239748820 PREDICTED: hypothetical protein XP_002346811 [Homo
           sapiens]
          Length = 266

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTF 184


>gi|239740859 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 3 isoform 1 [Homo sapiens]
          Length = 267

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 145 LVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTF 185


>gi|239740857 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 3 isoform 2 [Homo sapiens]
          Length = 266

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTF 184


>gi|24797076 major histocompatibility complex, class II, DP beta 1
           precursor [Homo sapiens]
          Length = 258

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 39  LVCHVSGFYPKPVWVMW-MRGEQEQRGTQRGDVLPNADETWWI 80
           LVCHV+ FYP  + V W + G++E  G    +++ N D T+ I
Sbjct: 142 LVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQI 184


>gi|52630344 major histocompatibility complex, class II, DR beta 4
           precursor [Homo sapiens]
          Length = 266

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC V+GFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 144 LVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 184


>gi|239758090 PREDICTED: major histocompatibility complex, class II,
           DR beta 4 [Homo sapiens]
          Length = 278

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC V+GFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 156 LVCSVNGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTF 196


>gi|169217452 PREDICTED: similar to HLA class II histocompatibility
           antigen, DRB1-4 beta chain, partial [Homo sapiens]
          Length = 223

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMR-GEQEQRGTQRGDVLPNADETW 78
           LVC V+GFYP  + V W R G++E+ G     ++ N D T+
Sbjct: 156 LVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTF 196


>gi|155030211 major histocompatibility complex, class II, DR beta 1
           precursor [Homo sapiens]
          Length = 266

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMW-MRGEQEQRGTQRGDVLPNADETW 78
           LVC VSGFYP  + V W + G++E+ G     ++ N D T+
Sbjct: 144 LVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTF 184


>gi|18641375 major histocompatibility complex, class II, DR beta 5
           precursor [Homo sapiens]
          Length = 266

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 39  LVCHVSGFYPKPVWVMWMRGEQEQR-GTQRGDVLPNADETW 78
           LVC V+GFYP  + V W R  QE++ G     ++ N D T+
Sbjct: 144 LVCSVNGFYPGSIEVRWFRNSQEEKAGVVSTGLIQNGDWTF 184


>gi|24797074 major histocompatibility complex, class II, DP alpha 1
           precursor [Homo sapiens]
          Length = 260

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 39  LVCHVSGFYPKPVWVMWM-RGEQEQRGTQRGDVLPNADETWWIFHL-----SHPDLFDC 91
           L+CH+  F+P  + V W+  GE    G      LP  D ++  FH      S  D +DC
Sbjct: 136 LICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDC 194


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.144    0.530 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,885,510
Number of Sequences: 37866
Number of extensions: 314758
Number of successful extensions: 818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 735
Number of HSP's gapped (non-prelim): 129
length of query: 101
length of database: 18,247,518
effective HSP length: 72
effective length of query: 29
effective length of database: 15,521,166
effective search space: 450113814
effective search space used: 450113814
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.