LOC100294276 16619

Name: LOC100294276	Sequence: fasta or formatted (266aa)		NCBI GI: 239740857
Description: PREDICTED: similar to major histocompatibility complex, class II, DR beta 3 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {267aa} PREDICTED: similar to major histocompatibility complex, class II,...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 8 1 C cysteine 2.3 6 1 D aspartate 3.0 8 1 E glutamate 6.8 18 2 F phenylalanine 5.6 15 2 G glycine 9.0 24 2 H histidine 3.4 9 2 I isoleucine 1.1 3 1 K lysine 2.6 7 1 L leucine 10.2 27 2 M methionine 1.9 5 1 N asparagine 3.8 10 1 P proline 4.5 12 1 Q glutamine 4.5 12 1 R arginine 7.9 21 2 S serine 8.3 22 2 T threonine 6.4 17 1 V valine 10.5 28 2 W tryptophan 1.5 4 1 Y tyrosine 3.8 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.962 PREDICTED: similar to major histocompatibility comp... LOC100290966 0.952 PREDICTED: hypothetical protein XP_002346811 HLA-DRB1 0.910 major histocompatibility complex, class II, DR beta... HLA-DRB3 0.909 major histocompatibility complex, class II, DR beta ... LOC100294275 0.905 PREDICTED: similar to major histocompatibility comp... LOC100294468 0.880 PREDICTED: similar to HLA class II histocompatibili... LOC100294275 0.876 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.876 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.876 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB5 0.855 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.853 major histocompatibility complex, class II, DR beta ... LOC100294189 0.758 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.758 PREDICTED: similar to HLA class II histocompatibili... LOC100294036 0.752 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.741 PREDICTED: major histocompatibility complex, class ... LOC100293977 0.596 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.596 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.594 PREDICTED: similar to major histocompatibility comp... LOC100133811 0.592 PREDICTED: similar to HLA class II histocompatibili... LOC100294278 0.592 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.592 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.577 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.577 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.575 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.573 major histocompatibility complex, class II, DQ beta... HLA-DPB1 0.549 major histocompatibility complex, class II, DP beta ... HLA-DOB 0.491 major histocompatibility complex, class II, DO beta p... LOC651845 0.438 PREDICTED: similar to MHC class II antigen LOC100133661 0.337 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.