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Search of human proteins with 164663824
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164663824 pregnancy specific beta-1-glycoprotein 11 isoform
2 [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164663826 pregnancy specific beta-1-glycoprotein 11 isoform 2... 447 e-126
gi|164663824 pregnancy specific beta-1-glycoprotein 11 isoform 2... 447 e-126
gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1... 401 e-112
gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo sapi... 335 1e-92
gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2 [... 305 2e-83
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi... 246 1e-65
gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor ... 238 3e-63
gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 236 8e-63
gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 236 8e-63
gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b [... 234 3e-62
gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [H... 233 1e-61
gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1 [... 229 2e-60
gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c ... 229 2e-60
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 228 2e-60
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 228 2e-60
gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo sapi... 222 2e-58
gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens] 221 4e-58
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 220 8e-58
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 214 3e-56
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 214 3e-56
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 211 5e-55
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 210 8e-55
gi|156564378 carcinoembryonic antigen-related cell adhesion mole... 126 1e-29
gi|156564393 carcinoembryonic antigen-related cell adhesion mole... 126 1e-29
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu... 113 1e-25
gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 105 3e-23
gi|156564390 carcinoembryonic antigen-related cell adhesion mole... 82 4e-16
gi|156564388 carcinoembryonic antigen-related cell adhesion mole... 82 4e-16
gi|157168355 CD22 molecule [Homo sapiens] 72 3e-13
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 69 3e-12
>gi|164663826 pregnancy specific beta-1-glycoprotein 11 isoform 2
[Homo sapiens]
Length = 213
Score = 447 bits (1150), Expect = e-126
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM 60
MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM 60
Query: 61 NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP 120
NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP
Sbjct: 61 NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP 120
Query: 121 RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS 180
RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS
Sbjct: 121 RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS 180
Query: 181 ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT 213
ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT
Sbjct: 181 ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT 213
>gi|164663824 pregnancy specific beta-1-glycoprotein 11 isoform 2
[Homo sapiens]
Length = 213
Score = 447 bits (1150), Expect = e-126
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM 60
MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM 60
Query: 61 NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP 120
NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP
Sbjct: 61 NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP 120
Query: 121 RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS 180
RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS
Sbjct: 121 RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACS 180
Query: 181 ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT 213
ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT
Sbjct: 181 ARNSATGEESSTSLTIRVIAPPGLGTFAFNNPT 213
>gi|164663836 pregnancy specific beta-1-glycoprotein 11 isoform 1
[Homo sapiens]
Length = 335
Score = 401 bits (1030), Expect = e-112
Identities = 192/194 (98%), Positives = 193/194 (99%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT
Sbjct: 142 LYLETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC
Sbjct: 202 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 261
Query: 140 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 199
FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI
Sbjct: 262 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 321
Query: 200 APPGLGTFAFNNPT 213
APPGLGTFAFNNPT
Sbjct: 322 APPGLGTFAFNNPT 335
Score = 72.4 bits (176), Expect = 3e-13
Identities = 70/243 (28%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTV---------ETPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCTEHIKWKGLLLT T + I + E + ++L N
Sbjct: 1 MGPLSAPPCTEHIKWKGLLLTALLLNFWNLPTTAQVMIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 94 ECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G +R + T L P I S + + E + L+C + P A Y
Sbjct: 121 TLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAMETVILTCNPET-PDASYL 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAP 201
W +NG + QLS + LF+ +T G Y C NS + S +T+ ++
Sbjct: 180 WWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSD-PVTLNLLHG 238
Query: 202 PGL 204
P L
Sbjct: 239 PDL 241
>gi|156616282 pregnancy specific beta-1-glycoprotein 2 [Homo
sapiens]
Length = 335
Score = 335 bits (860), Expect = 1e-92
Identities = 163/194 (84%), Positives = 171/194 (88%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNLNPREAMETVILTC+PETPD SY WWMNGQSLPMTHR QLSETNRT
Sbjct: 142 LYLETPKPSISSSNLNPREAMETVILTCDPETPDTSYQWWMNGQSLPMTHRFQLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFLFGVTKYTAGPYECEI NSGSASRSDPVTLNLLHGPDLPRI PS T+Y SG+NL LSC
Sbjct: 202 LFLFGVTKYTAGPYECEIRNSGSASRSDPVTLNLLHGPDLPRIHPSYTNYRSGDNLYLSC 261
Query: 140 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 199
FANSNPPAQYSWTINGKFQ SGQ LFIPQIT KH+GLY CS RNSATGEESSTSLT++V
Sbjct: 262 FANSNPPAQYSWTINGKFQQSGQNLFIPQITTKHSGLYVCSVRNSATGEESSTSLTVKVS 321
Query: 200 APPGLGTFAFNNPT 213
A +G NPT
Sbjct: 322 ASTRIGLLPLLNPT 335
Score = 78.2 bits (191), Expect = 5e-15
Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCTEHIKWKGLL+T T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTEHIKWKGLLVTASLLNFWNLPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y+W+ ++GQ + P + + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY 120
Query: 94 ECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G +R + T L P I S + + E + L+C + P Y
Sbjct: 121 TLHIIKRGDGTRGVTGYFTFTLYLETPKPSISSSNLNPREAMETVILTCDPET-PDTSYQ 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAP 201
W +NG +FQLS + LF+ +T G Y C RNS + S +T+ ++
Sbjct: 180 WWMNGQSLPMTHRFQLSETNRTLFLFGVTKYTAGPYECEIRNSGSASRSD-PVTLNLLHG 238
Query: 202 PGL 204
P L
Sbjct: 239 PDL 241
>gi|47419900 pregnancy specific beta-1-glycoprotein 4 isoform 2
[Homo sapiens]
Length = 326
Score = 305 bits (780), Expect = 2e-83
Identities = 148/179 (82%), Positives = 159/179 (88%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNLNPREAME VILTC+P TP ASY WWMNGQSLPMTHR+QLS+TNRT
Sbjct: 142 LHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQWWMNGQSLPMTHRLQLSKTNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LF+FGVTKY AGPYECEI N SASRSDPVTLNLLHGPDLP I+PS T Y SGENL LSC
Sbjct: 202 LFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLHGPDLPSIYPSFTYYRSGENLYLSC 261
Query: 140 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
FA SNP AQYSWTINGKFQLSGQKL IPQIT KH+GLYACS RNSATG+ESS S+T++V
Sbjct: 262 FAESNPRAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKV 320
Score = 65.5 bits (158), Expect = 3e-11
Identities = 67/243 (27%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+ I WKG+LLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
A Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 94 ECEI--WNSGSASRSDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G+ + T L P I S + + E + L+C + P A Y
Sbjct: 121 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTC-DPATPAASYQ 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAP 201
W +NG + QLS + LFI +T G Y C RN + S +T+ ++
Sbjct: 180 WWMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSD-PVTLNLLHG 238
Query: 202 PGL 204
P L
Sbjct: 239 PDL 241
>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
sapiens]
Length = 428
Score = 246 bits (628), Expect = 1e-65
Identities = 119/195 (61%), Positives = 147/195 (75%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLPKPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS PVTLN+L+GPDLPRI+PS T Y+SGENL L
Sbjct: 293 RILILPSVTRNETGPYQCEIQDRYGGIRSYPVTLNVLYGPDLPRIYPSFTYYHSGENLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCFA+SNPPA+YSWTINGKFQLSGQKLFIPQIT KH+GLYACS RNSATG ESS S+T++
Sbjct: 353 SCFADSNPPAEYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGMESSKSMTVK 412
Query: 198 VIAPPGLGTFAFNNP 212
V AP G G NP
Sbjct: 413 VSAPSGTGHLPGLNP 427
Score = 187 bits (474), Expect = 7e-48
Identities = 105/197 (53%), Positives = 127/197 (64%), Gaps = 16/197 (8%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNL PRE ME V LTC+PETPDASYLWWMNGQSLPMTH +QLS+ RT
Sbjct: 142 LYLETPKPSISSSNLYPREDMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLQLSKNKRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFLFGVTKYTAGPYECEI N SASRSDPVTLNLL P LP+ + ++ + EN D+
Sbjct: 202 LFLFGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PKLPKPYITINNLNPRENKDVLA 259
Query: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
F P ++ Y W +NG K + + L +P +T G Y C ++ G
Sbjct: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIQDRYGG 318
Query: 188 EESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 319 IR-SYPVTLNVLYGPDL 334
Score = 72.8 bits (177), Expect = 2e-13
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTV---------ETPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+ I WKGLLLT T + +I + + + ++L N
Sbjct: 1 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
A Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY 120
Query: 94 ECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLD---LSCFANSNPPAQYS 150
I G +R + + P+ S ++ Y E+++ L+C + P A Y
Sbjct: 121 TLHIVKRGDGTRGETGHFTFTLYLETPKPSISSSNLYPREDMEAVSLTCDPET-PDASYL 179
Query: 151 WTINGK-------FQLSGQK--LFIPQITPKHNGLYACSARNSATGEES 190
W +NG+ QLS K LF+ +T G Y C RN + S
Sbjct: 180 WWMNGQSLPMTHSLQLSKNKRTLFLFGVTKYTAGPYECEIRNPVSASRS 228
>gi|157805480 pregnancy specific beta-1-glycoprotein 7 precursor
[Homo sapiens]
Length = 419
Score = 238 bits (607), Expect = 3e-63
Identities = 114/181 (62%), Positives = 141/181 (77%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NLNPRE + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLPKPYITINNLNPRENKDVSTFTCEPKSENYTYIWWLNGQSLPVSPRVKRRIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RSDPVTLN+L+GPDLPRI+PS T Y+SG+NL L
Sbjct: 293 RILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYHSGQNLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCFA+SNPPAQYSWTINGKFQLSGQKL IPQIT KH+GLYACS RNSATG+ESS S+T+R
Sbjct: 353 SCFADSNPPAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSVTVR 412
Query: 198 V 198
V
Sbjct: 413 V 413
Score = 198 bits (504), Expect = 2e-51
Identities = 109/197 (55%), Positives = 131/197 (66%), Gaps = 16/197 (8%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSN NPREA E VILTC+PETPDASYLWWMNGQSLPMTH +QLSETNRT
Sbjct: 142 LYLETPKPSISSSNFNPREATEAVILTCDPETPDASYLWWMNGQSLPMTHSLQLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
L+LFGVT YTAGPYECEI N SASRSDPVTLNLL P LP+ + ++ + EN D+S
Sbjct: 202 LYLFGVTNYTAGPYECEIRNPVSASRSDPVTLNLL--PKLPKPYITINNLNPRENKDVST 259
Query: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
F P ++ Y W +NG K ++ + L +P +T G Y C R+ G
Sbjct: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRRIENRILILPSVTRNETGPYQCEIRDRYGG 318
Query: 188 EESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 319 IRSD-PVTLNVLYGPDL 334
Score = 63.2 bits (152), Expect = 2e-10
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+HI WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y+W+ ++GQ + P + +N +L + VT+ G Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYVTSYIVDGQIIKYGPAYSGRETVYSNASLLIQNVTQEDTGSY 120
Query: 94 ECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTS-----YYSGENLDLSCFANSNPPAQ 148
I G + + P+ PS++S + E + L+C + P A
Sbjct: 121 TLHIIKRGDGTGGVTGRFTFTLYLETPK--PSISSSNFNPREATEAVILTCDPET-PDAS 177
Query: 149 YSWTINGK-------FQLS--GQKLFIPQITPKHNGLYACSARNSATGEES 190
Y W +NG+ QLS + L++ +T G Y C RN + S
Sbjct: 178 YLWWMNGQSLPMTHSLQLSETNRTLYLFGVTNYTAGPYECEIRNPVSASRS 228
>gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 236 bits (603), Expect = 8e-63
Identities = 113/193 (58%), Positives = 139/193 (72%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L ++ PKP I+ +N PRE + + TC P++ + +Y+WW+NGQSLP++ R++ NR
Sbjct: 142 LYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRI 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
L L VT+ GPYECEI + RSDPVTLN+L+GPDLP I+PS T Y SGENL LSC
Sbjct: 202 LILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSC 261
Query: 140 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 199
FA SNPPA+Y WTINGKFQ SGQKL IPQIT KH GLY CS RNSATG+ESS S+T+ V
Sbjct: 262 FAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYTCSVRNSATGKESSKSMTVEVS 321
Query: 200 APPGLGTFAFNNP 212
AP G+G NP
Sbjct: 322 APSGIGRLPLLNP 334
Score = 76.3 bits (186), Expect = 2e-14
Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+HI WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
A Y+W+ GQ + + H + + +N +L + VT+ AG
Sbjct: 61 NLAGYIWY-KGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGS 119
Query: 93 YECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPPAQ-- 148
Y I G +R + T NL LP+ + ++ + EN D+ F P ++
Sbjct: 120 YTLHIIKRGDRTRGVTGYFTFNLY--LKLPKPYITINNSKPRENKDVLAF-TCEPKSENY 176
Query: 149 -YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
Y W +NG K + + L +P +T G Y C R+ G S +T+ V
Sbjct: 177 TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSD-PVTLNV 235
Query: 199 IAPPGL 204
+ P L
Sbjct: 236 LYGPDL 241
>gi|194097367 pregnancy specific beta-1-glycoprotein 5 [Homo
sapiens]
Length = 335
Score = 236 bits (603), Expect = 8e-63
Identities = 113/193 (58%), Positives = 139/193 (72%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L ++ PKP I+ +N PRE + + TC P++ + +Y+WW+NGQSLP++ R++ NR
Sbjct: 142 LYLKLPKPYITINNSKPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRI 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
L L VT+ GPYECEI + RSDPVTLN+L+GPDLP I+PS T Y SGENL LSC
Sbjct: 202 LILPSVTRNETGPYECEIRDRDGGMRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSC 261
Query: 140 FANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 199
FA SNPPA+Y WTINGKFQ SGQKL IPQIT KH GLY CS RNSATG+ESS S+T+ V
Sbjct: 262 FAESNPPAEYFWTINGKFQQSGQKLSIPQITTKHRGLYTCSVRNSATGKESSKSMTVEVS 321
Query: 200 APPGLGTFAFNNP 212
AP G+G NP
Sbjct: 322 APSGIGRLPLLNP 334
Score = 76.3 bits (186), Expect = 2e-14
Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+HI WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPITAQVTIEALPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
A Y+W+ GQ + + H + + +N +L + VT+ AG
Sbjct: 61 NLAGYIWY-KGQLMDLYHYITSYVVDGQINIYGPAYTGRETVYSNASLLIQNVTREDAGS 119
Query: 93 YECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPPAQ-- 148
Y I G +R + T NL LP+ + ++ + EN D+ F P ++
Sbjct: 120 YTLHIIKRGDRTRGVTGYFTFNLY--LKLPKPYITINNSKPRENKDVLAF-TCEPKSENY 176
Query: 149 -YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
Y W +NG K + + L +P +T G Y C R+ G S +T+ V
Sbjct: 177 TYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYECEIRDRDGGMRSD-PVTLNV 235
Query: 199 IAPPGL 204
+ P L
Sbjct: 236 LYGPDL 241
>gi|73661174 pregnancy specific beta-1-glycoprotein 6 isoform b
[Homo sapiens]
Length = 424
Score = 234 bits (598), Expect = 3e-62
Identities = 111/184 (60%), Positives = 140/184 (76%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + P P I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 232 LNLLPKLPMPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIEN 291
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS+PVTLN+L+GPDLPRI+PS T Y SGENLDL
Sbjct: 292 RILILPSVTRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDL 351
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCFA+SNPPA+YSWTINGKFQLSGQKLFIPQIT H+GLYACS RNSATG+E S S+ ++
Sbjct: 352 SCFADSNPPAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVK 411
Query: 198 VIAP 201
V P
Sbjct: 412 VSGP 415
Score = 182 bits (461), Expect = 2e-46
Identities = 101/193 (52%), Positives = 123/193 (63%), Gaps = 14/193 (7%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
ETPKPSISSSNLNPRE ME V L C+PETPDASYLW +NGQ+LPMTHR+QLS+TNRTL+L
Sbjct: 144 ETPKPSISSSNLNPREVMEAVRLICDPETPDASYLWLLNGQNLPMTHRLQLSKTNRTLYL 203
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
FGVTKY AGPYECEI N SASRSDPVTLNLL P LP + ++ + E D+ F
Sbjct: 204 FGVTKYIAGPYECEIRNPVSASRSDPVTLNLL--PKLPMPYITINNLNPREKKDVLAFTC 261
Query: 143 SNPPAQYS--WTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESS 191
Y+ W +NG K + + L +P +T G Y C R+ G S+
Sbjct: 262 EPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSN 321
Query: 192 TSLTIRVIAPPGL 204
+T+ V+ P L
Sbjct: 322 -PVTLNVLYGPDL 333
Score = 65.1 bits (157), Expect = 4e-11
Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 44/251 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+HI WKGLLLT T + I + E + ++L N
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL--PMTHRMQLSETNRTLFLFGVTKYTAGPYE 94
Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQIIYGPAYSGRETVYSNASLLIQNVTQEDAGSYT 120
Query: 95 CEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSG-----ENLDLSCFANSNPPAQY 149
I G + + + P+ PS++S E + L C + P A Y
Sbjct: 121 LHIIKRGDGTGGVTGYFTVTLYSETPK--PSISSSNLNPREVMEAVRLICDPET-PDASY 177
Query: 150 SWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIA 200
W +NG + QLS + L++ +T G Y C RN + S +T+ ++
Sbjct: 178 LWLLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSD-PVTLNLLP 236
Query: 201 PPGLGTFAFNN 211
+ NN
Sbjct: 237 KLPMPYITINN 247
>gi|4506175 pregnancy specific beta-1-glycoprotein 6 isoform a [Homo
sapiens]
Length = 435
Score = 233 bits (593), Expect = 1e-61
Identities = 110/181 (60%), Positives = 139/181 (76%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + P P I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 232 LNLLPKLPMPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIEN 291
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS+PVTLN+L+GPDLPRI+PS T Y SGENLDL
Sbjct: 292 RILILPSVTRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDL 351
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCFA+SNPPA+YSWTINGKFQLSGQKLFIPQIT H+GLYACS RNSATG+E S S+ ++
Sbjct: 352 SCFADSNPPAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVK 411
Query: 198 V 198
V
Sbjct: 412 V 412
Score = 182 bits (461), Expect = 2e-46
Identities = 101/193 (52%), Positives = 123/193 (63%), Gaps = 14/193 (7%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
ETPKPSISSSNLNPRE ME V L C+PETPDASYLW +NGQ+LPMTHR+QLS+TNRTL+L
Sbjct: 144 ETPKPSISSSNLNPREVMEAVRLICDPETPDASYLWLLNGQNLPMTHRLQLSKTNRTLYL 203
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
FGVTKY AGPYECEI N SASRSDPVTLNLL P LP + ++ + E D+ F
Sbjct: 204 FGVTKYIAGPYECEIRNPVSASRSDPVTLNLL--PKLPMPYITINNLNPREKKDVLAFTC 261
Query: 143 SNPPAQYS--WTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESS 191
Y+ W +NG K + + L +P +T G Y C R+ G S+
Sbjct: 262 EPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGGIRSN 321
Query: 192 TSLTIRVIAPPGL 204
+T+ V+ P L
Sbjct: 322 -PVTLNVLYGPDL 333
Score = 65.1 bits (157), Expect = 4e-11
Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 44/251 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+HI WKGLLLT T + I + E + ++L N
Sbjct: 1 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL--PMTHRMQLSETNRTLFLFGVTKYTAGPYE 94
Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQMTDLYHYITSYVVHGQIIYGPAYSGRETVYSNASLLIQNVTQEDAGSYT 120
Query: 95 CEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSG-----ENLDLSCFANSNPPAQY 149
I G + + + P+ PS++S E + L C + P A Y
Sbjct: 121 LHIIKRGDGTGGVTGYFTVTLYSETPK--PSISSSNLNPREVMEAVRLICDPET-PDASY 177
Query: 150 SWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIA 200
W +NG + QLS + L++ +T G Y C RN + S +T+ ++
Sbjct: 178 LWLLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSD-PVTLNLLP 236
Query: 201 PPGLGTFAFNN 211
+ NN
Sbjct: 237 KLPMPYITINN 247
>gi|42560235 pregnancy specific beta-1-glycoprotein 4 isoform 1
[Homo sapiens]
Length = 419
Score = 229 bits (583), Expect = 2e-60
Identities = 111/181 (61%), Positives = 137/181 (75%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + KP I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLSKPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RSDPVTLN+L+GPDLP I+PS T Y SGENL L
Sbjct: 293 RILILPNVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCFA SNP AQYSWTINGKFQLSGQKL IPQIT KH+GLYACS RNSATG+ESS S+T++
Sbjct: 353 SCFAESNPRAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVK 412
Query: 198 V 198
V
Sbjct: 413 V 413
Score = 189 bits (480), Expect = 2e-48
Identities = 105/196 (53%), Positives = 126/196 (64%), Gaps = 14/196 (7%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNLNPREAME VILTC+P TP ASY WWMNGQSLPMTHR+QLS+TNRT
Sbjct: 142 LHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQWWMNGQSLPMTHRLQLSKTNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LF+FGVTKY AGPYECEI N SASRSDPVTLNLL P L + + ++ + EN D+
Sbjct: 202 LFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLL--PKLSKPYITINNLNPRENKDVLT 259
Query: 140 FANSNPPAQYS--WTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGE 188
F Y+ W +NG K + + L +P +T G Y C R+ G
Sbjct: 260 FTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYGGI 319
Query: 189 ESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 320 RSD-PVTLNVLYGPDL 334
Score = 63.9 bits (154), Expect = 1e-10
Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 40/229 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPLSAPPCT+ I WKG+LLT T + +I + E + ++L N
Sbjct: 1 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
A Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY 120
Query: 94 ECEI--WNSGSASRSDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G+ + T L P I S + + E + L+C + P A Y
Sbjct: 121 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTC-DPATPAASYQ 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEES 190
W +NG + QLS + LFI +T G Y C RN + S
Sbjct: 180 WWMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRS 228
>gi|194328712 pregnancy specific beta-1-glycoprotein 8 isoform c
[Homo sapiens]
Length = 297
Score = 229 bits (583), Expect = 2e-60
Identities = 125/216 (57%), Positives = 146/216 (67%), Gaps = 16/216 (7%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWM 60
MG LSAPPCT+ I WKGLLLTVETPKPSISSS LNPREAME V LTC+PETPDASYLWWM
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTVETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWM 60
Query: 61 NGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLP 120
NGQSLPM+HR+QLSETNRTLFL GVTKYTAGPYECEI N SASRSDP TLNLL P LP
Sbjct: 61 NGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLL--PKLP 118
Query: 121 RIFPSVTSYYSGENLDLSCFANSNPPAQ---YSWTING---------KFQLSGQKLFIPQ 168
+ + ++ + EN D+ F P ++ Y W +NG K + + L +P
Sbjct: 119 KPYITINNLKPRENKDVLNF-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPS 177
Query: 169 ITPKHNGLYACSARNSATGEESSTSLTIRVIAPPGL 204
+T G Y C R+ G S +T+ V+ P L
Sbjct: 178 VTRNETGPYQCEIRDQYGGIR-SYPVTLNVLYGPDL 212
Score = 228 bits (582), Expect = 2e-60
Identities = 111/181 (61%), Positives = 138/181 (76%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NL PRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 111 LNLLPKLPKPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 170
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS PVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 171 RILILPSVTRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 230
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SC A+SNPPAQYSWTINGKFQLSGQKLFIPQIT KH+GLYACS RNSATG+ESS S+T++
Sbjct: 231 SCSADSNPPAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVK 290
Query: 198 V 198
V
Sbjct: 291 V 291
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 228 bits (582), Expect = 2e-60
Identities = 111/181 (61%), Positives = 138/181 (76%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NL PRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLPKPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS PVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 293 RILILPSVTRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SC A+SNPPAQYSWTINGKFQLSGQKLFIPQIT KH+GLYACS RNSATG+ESS S+T++
Sbjct: 353 SCSADSNPPAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVK 412
Query: 198 V 198
V
Sbjct: 413 V 413
Score = 193 bits (490), Expect = 1e-49
Identities = 108/197 (54%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSS LNPREAME V LTC+PETPDASYLWWMNGQSLPM+HR+QLSETNRT
Sbjct: 142 LYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNGQSLPMSHRLQLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFL GVTKYTAGPYECEI N SASRSDP TLNLL P LP+ + ++ + EN D+
Sbjct: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLL--PKLPKPYITINNLKPRENKDVLN 259
Query: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
F P ++ Y W +NG K + + L +P +T G Y C R+ G
Sbjct: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDQYGG 318
Query: 188 EESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 319 IR-SYPVTLNVLYGPDL 334
Score = 63.5 bits (153), Expect = 1e-10
Identities = 63/229 (27%), Positives = 93/229 (40%), Gaps = 40/229 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MG LSAPPCT+ I WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 94 ECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G +R + T L P I S + + E + L+C + P A Y
Sbjct: 121 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPET-PDASYL 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEES 190
W +NG + QLS + LF+ +T G Y C RN + S
Sbjct: 180 WWMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRS 228
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 228 bits (582), Expect = 2e-60
Identities = 111/181 (61%), Positives = 138/181 (76%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NL PRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLPKPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS PVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 293 RILILPSVTRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SC A+SNPPAQYSWTINGKFQLSGQKLFIPQIT KH+GLYACS RNSATG+ESS S+T++
Sbjct: 353 SCSADSNPPAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVK 412
Query: 198 V 198
V
Sbjct: 413 V 413
Score = 193 bits (490), Expect = 1e-49
Identities = 108/197 (54%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSS LNPREAME V LTC+PETPDASYLWWMNGQSLPM+HR+QLSETNRT
Sbjct: 142 LYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNGQSLPMSHRLQLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFL GVTKYTAGPYECEI N SASRSDP TLNLL P LP+ + ++ + EN D+
Sbjct: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLL--PKLPKPYITINNLKPRENKDVLN 259
Query: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
F P ++ Y W +NG K + + L +P +T G Y C R+ G
Sbjct: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDQYGG 318
Query: 188 EESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 319 IR-SYPVTLNVLYGPDL 334
Score = 63.5 bits (153), Expect = 1e-10
Identities = 63/229 (27%), Positives = 93/229 (40%), Gaps = 40/229 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MG LSAPPCT+ I WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWW---------------MNGQSL---PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y+W+ ++GQ + P + +N +L + VT+ AG Y
Sbjct: 61 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY 120
Query: 94 ECEIWNSGSASR--SDPVTLNLLHGPDLPRIFPS-VTSYYSGENLDLSCFANSNPPAQYS 150
I G +R + T L P I S + + E + L+C + P A Y
Sbjct: 121 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPET-PDASYL 179
Query: 151 WTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEES 190
W +NG + QLS + LF+ +T G Y C RN + S
Sbjct: 180 WWMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRS 228
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 41 ETVILTCNPET-PDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWN 99
E + L+C+ ++ P A Y W +NG + QLS + LF+ +T +G Y C + N
Sbjct: 348 EVLYLSCSADSNPPAQYSWTING-------KFQLS--GQKLFIPQITTKHSGLYACSVRN 398
Query: 100 SGSASRSDPVTLNLLHGPDLP 120
S + S + G +P
Sbjct: 399 SATGKESSKSMTVKVSGKRIP 419
>gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo
sapiens]
Length = 426
Score = 222 bits (566), Expect = 2e-58
Identities = 106/184 (57%), Positives = 134/184 (72%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + P P I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ ++ N
Sbjct: 233 LNLLPKLPIPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPGVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RS+PV LN+L+GPDLPRI+PS T Y SGENLDL
Sbjct: 293 RILILPSVTRNETGPYQCEIRDRYGGLRSNPVILNVLYGPDLPRIYPSFTYYRSGENLDL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SCF SNPPA+Y WTINGKFQ SGQKLFIPQIT H+GLYACS NSATG+E S S+T++
Sbjct: 353 SCFTESNPPAEYFWTINGKFQQSGQKLFIPQITRNHSGLYACSVHNSATGKEISKSMTVK 412
Query: 198 VIAP 201
V P
Sbjct: 413 VSGP 416
Score = 184 bits (468), Expect = 4e-47
Identities = 106/206 (51%), Positives = 130/206 (63%), Gaps = 16/206 (7%)
Query: 11 EHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHR 70
E I+ L +ETPKP ISSSNLNPREAME V L C+PET DASYLWWMNGQSLP+THR
Sbjct: 133 EEIRHFTFTLYLETPKPYISSSNLNPREAMEAVRLICDPETLDASYLWWMNGQSLPVTHR 192
Query: 71 MQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYY 130
+QLS+TNRTL+LFGVTKY AGPYECEI N SASRSDPVTLNLL P LP + ++ +
Sbjct: 193 LQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLL--PKLPIPYITINNLN 250
Query: 131 SGENLDLSCFANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYA 178
EN D+ F P ++ Y W +NG K + + L +P +T G Y
Sbjct: 251 PRENKDVLAF-TCEPKSENYTYIWWLNGQSLPVSPGVKRPIENRILILPSVTRNETGPYQ 309
Query: 179 CSARNSATGEESSTSLTIRVIAPPGL 204
C R+ G S+ + + V+ P L
Sbjct: 310 CEIRDRYGGLRSN-PVILNVLYGPDL 334
Score = 54.3 bits (129), Expect = 8e-08
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 43/251 (17%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGPL AP CT+ I WKGLLLT T + +I + E + ++L N
Sbjct: 1 MGPLPAPSCTQRITWKGLLLTASLLNFWNPPTTAEVTIEAQPPKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
Y W+ G+ + H + + +N +L + VT+ AG
Sbjct: 61 NLPGYFWY-KGEMTDLYHYIISYIVDGKIIIYGPAYSGRETVYSNASLLIQNVTRKDAGT 119
Query: 93 YECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLD---LSCFANSNPPAQY 149
Y I G +R + + P+ + S ++ E ++ L C + A Y
Sbjct: 120 YTLHIIKRGDETREEIRHFTFTLYLETPKPYISSSNLNPREAMEAVRLICDPET-LDASY 178
Query: 150 SWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIA 200
W +NG + QLS + L++ +T G Y C RN + S +T+ ++
Sbjct: 179 LWWMNGQSLPVTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSD-PVTLNLLP 237
Query: 201 PPGLGTFAFNN 211
+ NN
Sbjct: 238 KLPIPYITINN 248
>gi|21361392 pregnancy specific beta-1-glycoprotein 1 [Homo sapiens]
Length = 426
Score = 221 bits (563), Expect = 4e-58
Identities = 108/181 (59%), Positives = 134/181 (74%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L L + PKP I+ +NLNPRE + + TC P++ + +Y+WW+NGQSLP++ R++ N
Sbjct: 233 LNLLPKLPKPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIEN 292
Query: 78 RTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDL 137
R L L VT+ GPY+CEI + RSDPVTLN+L+GPDLPRI+PS T Y SGE L L
Sbjct: 293 RILILPSVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYL 352
Query: 138 SCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
SC A+SNPPAQYSWTIN KFQL GQKLFI IT KH+GLY CS RNSATG+ESS S+T+
Sbjct: 353 SCSADSNPPAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVE 412
Query: 198 V 198
V
Sbjct: 413 V 413
Score = 194 bits (492), Expect = 6e-50
Identities = 108/197 (54%), Positives = 129/197 (65%), Gaps = 16/197 (8%)
Query: 20 LTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRT 79
L +ETPKPSISSSNLNPRE ME V LTC+PETPDASYLWWMNGQSLPMTH ++LSETNRT
Sbjct: 142 LHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRT 201
Query: 80 LFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSC 139
LFL GVTKYTAGPYECEI N SASRSDPVTLNLL P LP+ + ++ + EN D+
Sbjct: 202 LFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLL--PKLPKPYITINNLNPRENKDVLN 259
Query: 140 FANSNPPAQ---YSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATG 187
F P ++ Y W +NG K + + L +P +T G Y C R+ G
Sbjct: 260 F-TCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSVTRNETGPYQCEIRDRYGG 318
Query: 188 EESSTSLTIRVIAPPGL 204
S +T+ V+ P L
Sbjct: 319 IRSD-PVTLNVLYGPDL 334
Score = 66.2 bits (160), Expect = 2e-11
Identities = 62/232 (26%), Positives = 92/232 (39%), Gaps = 46/232 (19%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MG LSAPPCT+ IKWKGLLLT T + +I + E + ++L N
Sbjct: 1 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
Y+W+ GQ + H + + + +N +L + VT+ AG
Sbjct: 61 NLTGYIWY-KGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGS 119
Query: 93 YECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTS-----YYSGENLDLSCFANSNPPA 147
Y I +R VT L PS++S + E + L+C + P A
Sbjct: 120 YTLHIIKGDDGTRG--VTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPET-PDA 176
Query: 148 QYSWTING---------KFQLSGQKLFIPQITPKHNGLYACSARNSATGEES 190
Y W +NG K + + LF+ +T G Y C RN + S
Sbjct: 177 SYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRS 228
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 220 bits (560), Expect = 8e-58
Identities = 107/176 (60%), Positives = 128/176 (72%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
ETPKPSISS+N NP E + V TC PET + +YLWW+NGQSLP++ R+QLS NRTL L
Sbjct: 143 ETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTL 202
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
VT+ GPYECEI N SA+ SDPVTLN+L+GPD P I PS T Y++G NL+LSC A
Sbjct: 203 LSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAPTISPSDTYYHAGVNLNLSCHAA 262
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
SNPP+QYSW++NG FQ QKLFIP IT K++G YAC NSATG +T I V
Sbjct: 263 SNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACHTTNSATGRNRTTVRMITV 318
Score = 55.5 bits (132), Expect = 3e-08
Identities = 62/249 (24%), Positives = 97/249 (38%), Gaps = 47/249 (18%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGP+SAP C I W+GLLLT T + +I + N E E ++L N
Sbjct: 1 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-------------------QLSETNRTLFLFGVTKYTAGP 92
Y W+ G+++ R+ + N +L + VT+ G
Sbjct: 61 DPRGYNWY-KGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGS 119
Query: 93 YECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPP----AQ 148
Y ++ S+ VT P+ P+ PS++S S D A + P
Sbjct: 120 YTLQVIKLN--LMSEEVTGQFSVHPETPK--PSISSNNSNPVEDKDAVAFTCEPETQNTT 175
Query: 149 YSWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVI 199
Y W +NG + QLS + L + +T G Y C +N A+ S +T+ V+
Sbjct: 176 YLWWVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASA-NFSDPVTLNVL 234
Query: 200 APPGLGTFA 208
P T +
Sbjct: 235 YGPDAPTIS 243
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 214 bits (546), Expect = 3e-56
Identities = 107/176 (60%), Positives = 123/176 (69%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKPSISS+N NP E + V TC PET D +YLWW+N QSLP++ R+QLS NRTL L
Sbjct: 143 ELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTL 202
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
VT+ GPYECEI N SA+RSDPVTLN+ +GPD P I PS T Y G NL LSC+A
Sbjct: 203 LSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAA 262
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
SNPPAQYSW ING FQ S Q+LFIP IT ++G Y C A NS TG +T TI V
Sbjct: 263 SNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIV 318
Score = 67.0 bits (162), Expect = 1e-11
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 16 KGLLLTVETP---KPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQ 72
K +++T +P KP I +S ++V LTC+ S W+ QSLP + RM+
Sbjct: 314 KTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMK 373
Query: 73 LSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNL 113
LS+ N TL + V + AG Y CE++N S ++SDP+ LN+
Sbjct: 374 LSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNV 414
Score = 42.4 bits (98), Expect = 3e-04
Identities = 59/248 (23%), Positives = 90/248 (36%), Gaps = 45/248 (18%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MG LSAP + W+GLLLT T + + S N E E ++L N
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 52 PDASYLWWM------NGQSL------------PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y W+ N Q + P + N +L + VT+ G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 94 ECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPP----AQY 149
++ S + ++ P+LP+ PS++S S D A + P Y
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY--PELPK--PSISSNNSNPVEDKDAVAFTCEPETQDTTY 176
Query: 150 SWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIA 200
W IN + QLS + L + +T G Y C +N + S +T+ V
Sbjct: 177 LWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSD-PVTLNVTY 235
Query: 201 PPGLGTFA 208
P T +
Sbjct: 236 GPDTPTIS 243
Score = 30.0 bits (66), Expect = 1.5
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L +T P+IS S+ R + P A Y W +NG ++
Sbjct: 231 LNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPAQYSWLING---------TFQQST 281
Query: 78 RTLFLFGVTKYTAGPYECEIWNS 100
+ LF+ +T +G Y C NS
Sbjct: 282 QELFIPNITVNNSGSYTCHANNS 304
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 214 bits (546), Expect = 3e-56
Identities = 107/176 (60%), Positives = 123/176 (69%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKPSISS+N NP E + V TC PET D +YLWW+N QSLP++ R+QLS NRTL L
Sbjct: 143 ELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTL 202
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
VT+ GPYECEI N SA+RSDPVTLN+ +GPD P I PS T Y G NL LSC+A
Sbjct: 203 LSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAA 262
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
SNPPAQYSW ING FQ S Q+LFIP IT ++G Y C A NS TG +T TI V
Sbjct: 263 SNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIV 318
Score = 67.0 bits (162), Expect = 1e-11
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 16 KGLLLTVETP---KPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQ 72
K +++T +P KP I +S ++V LTC+ S W+ QSLP + RM+
Sbjct: 314 KTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMK 373
Query: 73 LSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNL 113
LS+ N TL + V + AG Y CE++N S ++SDP+ LN+
Sbjct: 374 LSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNV 414
Score = 42.4 bits (98), Expect = 3e-04
Identities = 59/248 (23%), Positives = 90/248 (36%), Gaps = 45/248 (18%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MG LSAP + W+GLLLT T + + S N E E ++L N
Sbjct: 1 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 60
Query: 52 PDASYLWWM------NGQSL------------PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y W+ N Q + P + N +L + VT+ G Y
Sbjct: 61 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 94 ECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPP----AQY 149
++ S + ++ P+LP+ PS++S S D A + P Y
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY--PELPK--PSISSNNSNPVEDKDAVAFTCEPETQDTTY 176
Query: 150 SWTING-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIA 200
W IN + QLS + L + +T G Y C +N + S +T+ V
Sbjct: 177 LWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSD-PVTLNVTY 235
Query: 201 PPGLGTFA 208
P T +
Sbjct: 236 GPDTPTIS 243
Score = 30.0 bits (66), Expect = 1.5
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 9/83 (10%)
Query: 18 LLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETN 77
L +T P+IS S+ R + P A Y W +NG ++
Sbjct: 231 LNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPAQYSWLING---------TFQQST 281
Query: 78 RTLFLFGVTKYTAGPYECEIWNS 100
+ LF+ +T +G Y C NS
Sbjct: 282 QELFIPNITVNNSGSYTCHANNS 304
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 211 bits (536), Expect = 5e-55
Identities = 108/189 (57%), Positives = 125/189 (66%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKPSISS+N P E + V TC PET DA+YLWW+N QSLP++ R+QLS NRTL L
Sbjct: 143 ELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTL 202
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
F VT+ Y+CE N SA RSD V LN+L+GPD P I P TSY SGENL+LSC A
Sbjct: 203 FNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAA 262
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPP 202
SNPPAQYSW +NG FQ S Q+LFIP IT ++G Y C A NS TG +T TI V A P
Sbjct: 263 SNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEP 322
Query: 203 GLGTFAFNN 211
NN
Sbjct: 323 PKPFITSNN 331
Score = 199 bits (506), Expect = 1e-51
Identities = 102/189 (53%), Positives = 122/189 (64%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKP I+S+N NP E + V LTC PE + +YLWW+N QSLP++ R+QLS NRTL L
Sbjct: 321 EPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTL 380
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
VT+ GPYEC I N S SDPV LN+L+GPD P I PS T Y G NL LSC A
Sbjct: 381 LSVTRNDVGPYECGIQNKLSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA 440
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPP 202
SNPPAQYSW I+G Q Q+LFI IT K++GLY C A NSA+G +T TI V A
Sbjct: 441 SNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAEL 500
Query: 203 GLGTFAFNN 211
+ + NN
Sbjct: 501 PKPSISSNN 509
Score = 196 bits (499), Expect = 9e-51
Identities = 105/196 (53%), Positives = 128/196 (65%), Gaps = 3/196 (1%)
Query: 16 KGLLLTVETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSE 75
K + ++ E PKPSISS+N P E + V TC PE + +YLWW+NGQSLP++ R+QLS
Sbjct: 492 KTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSN 551
Query: 76 TNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENL 135
NRTL LF VT+ A Y C I NS SA+RSDPVTL++L+GPD P I P +SY SG NL
Sbjct: 552 GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANL 611
Query: 136 DLSCFANSNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLT 195
+LSC + SNP QYSW ING Q Q LFI +ITP +NG YAC N ATG +S +
Sbjct: 612 NLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKS 671
Query: 196 IRVIA---PPGLGTFA 208
I V A PGL A
Sbjct: 672 ITVSASGTSPGLSAGA 687
Score = 37.4 bits (85), Expect = 0.010
Identities = 57/244 (23%), Positives = 89/244 (36%), Gaps = 45/244 (18%)
Query: 5 SAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPETPDAS 55
SAPP I W+ LLLT T K +I S+ N E E ++L N
Sbjct: 5 SAPPHRWCIPWQRLLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLVHNLPQHLFG 64
Query: 56 YLWWM------NGQSL------------PMTHRMQLSETNRTLFLFGVTKYTAGPYECEI 97
Y W+ N Q + P ++ N +L + + + G Y +
Sbjct: 65 YSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFYTLHV 124
Query: 98 WNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPP----AQYSWTI 153
S ++ T P+LP+ PS++S S D A + P A Y W +
Sbjct: 125 IKSDLV--NEEATGQFRVYPELPK--PSISSNNSKPVEDKDAVAFTCEPETQDATYLWWV 180
Query: 154 NG-------KFQLS--GQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPPGL 204
N + QLS + L + +T Y C +N + S S+ + V+ P
Sbjct: 181 NNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSD-SVILNVLYGPDA 239
Query: 205 GTFA 208
T +
Sbjct: 240 PTIS 243
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 210 bits (534), Expect = 8e-55
Identities = 105/176 (59%), Positives = 123/176 (69%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKPSISS+N NP E + V TC PE + +YLWW+NGQSLP++ R+QLS N TL L
Sbjct: 143 ELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLWWVNGQSLPVSPRLQLSNGNMTLTL 202
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFAN 142
V + AG YECEI N SA+RSDPVTLN+L+GPD P I PS +Y GENL+LSC A
Sbjct: 203 LSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPDGPTISPSKANYRPGENLNLSCHAA 262
Query: 143 SNPPAQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
SNPPAQYSW ING FQ S Q+LFIP IT ++G Y C A NSATG +T I V
Sbjct: 263 SNPPAQYSWFINGTFQQSTQELFIPNITVNNSGSYMCQAHNSATGLNRTTVTMITV 318
Score = 64.7 bits (156), Expect = 6e-11
Identities = 64/242 (26%), Positives = 98/242 (40%), Gaps = 45/242 (18%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVE---------TPKPSISSSNLNPREAMETVILTCNPET 51
MGP SAPPC H+ WK +LLT T K +I S+ N E E ++L N
Sbjct: 1 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 60
Query: 52 PDASYLWW----MNGQSL--------------PMTHRMQLSETNRTLFLFGVTKYTAGPY 93
Y W+ ++G SL P + N +L + VT+ G Y
Sbjct: 61 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY 120
Query: 94 ECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPP----AQY 149
++ S + ++ P+LP+ PS++S S D A + P Y
Sbjct: 121 TLQVIKSDLVNEEATGQFHVY--PELPK--PSISSNNSNPVEDKDAVAFTCEPEVQNTTY 176
Query: 150 SWTING-------KFQLSGQKLFIPQITPKHN--GLYACSARNSATGEESSTSLTIRVIA 200
W +NG + QLS + + ++ K N G Y C +N A+ S +T+ V+
Sbjct: 177 LWWVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSD-PVTLNVLY 235
Query: 201 PP 202
P
Sbjct: 236 GP 237
Score = 39.3 bits (90), Expect = 0.003
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 27 PSISSSNLNPREAMETVILTCNPET-PDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGV 85
P+IS S N R E + L+C+ + P A Y W++NG ++ + LF+ +
Sbjct: 240 PTISPSKANYRPG-ENLNLSCHAASNPPAQYSWFINGT---------FQQSTQELFIPNI 289
Query: 86 TKYTAGPYECEIWNSGSASRSDPVTLNLLHG 116
T +G Y C+ NS + VT+ + G
Sbjct: 290 TVNNSGSYMCQAHNSATGLNRTTVTMITVSG 320
>gi|156564378 carcinoembryonic antigen-related cell adhesion
molecule 20 5L [Homo sapiens]
Length = 596
Score = 126 bits (317), Expect = 1e-29
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 27 PSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVT 86
P + S+LN E +V LTC + W+++GQ L + +QLS NRTL + G+
Sbjct: 256 PQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQ 315
Query: 87 KYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENLDLSC 139
+ GPY CE+WN GS +RS+P+ L + +GPD I S +L L C
Sbjct: 316 RNDTGPYACEVWNWGSRARSEPLELTINYGPDQVHITRESASEMISTIEAELNSSLTLQC 375
Query: 140 FANSNPPAQYSWTI-NGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
+A S P A+Y WT+ + + G++L I +T +H+G+Y C+A NS TG STS+ ++V
Sbjct: 376 WAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASNSLTGLARSTSVLVKV 435
Query: 199 IAP 201
+ P
Sbjct: 436 VGP 438
Score = 81.6 bits (200), Expect = 4e-16
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E KPSI+ S E + V C + + + W N S+ RMQLS+ + L +
Sbjct: 66 ELAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTI 125
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENL 135
V + +G Y+CE ++ + RSDP+ L++ +GPD I V G ++
Sbjct: 126 LIVQREDSGTYQCEARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVVEVMEGSSM 185
Query: 136 DLSCFANSNPPAQYSWTINGKFQLSGQKLF-IPQITPKHNGLYACSARNSATGEESSTSL 194
S+PP Y+W + + F I ++ +H GLY C NSAT S +L
Sbjct: 186 TFLAETKSHPPCAYTWFLLDSILSHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTL 245
Query: 195 TIRVI 199
+RV+
Sbjct: 246 KVRVL 250
>gi|156564393 carcinoembryonic antigen-related cell adhesion
molecule 20 5S [Homo sapiens]
Length = 584
Score = 126 bits (317), Expect = 1e-29
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 27 PSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVT 86
P + S+LN E +V LTC + W+++GQ L + +QLS NRTL + G+
Sbjct: 256 PQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQ 315
Query: 87 KYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENLDLSC 139
+ GPY CE+WN GS +RS+P+ L + +GPD I S +L L C
Sbjct: 316 RNDTGPYACEVWNWGSRARSEPLELTINYGPDQVHITRESASEMISTIEAELNSSLTLQC 375
Query: 140 FANSNPPAQYSWTI-NGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRV 198
+A S P A+Y WT+ + + G++L I +T +H+G+Y C+A NS TG STS+ ++V
Sbjct: 376 WAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASNSLTGLARSTSVLVKV 435
Query: 199 IAP 201
+ P
Sbjct: 436 VGP 438
Score = 81.6 bits (200), Expect = 4e-16
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E KPSI+ S E + V C + + + W N S+ RMQLS+ + L +
Sbjct: 66 ELAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTI 125
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENL 135
V + +G Y+CE ++ + RSDP+ L++ +GPD I V G ++
Sbjct: 126 LIVQREDSGTYQCEARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVVEVMEGSSM 185
Query: 136 DLSCFANSNPPAQYSWTINGKFQLSGQKLF-IPQITPKHNGLYACSARNSATGEESSTSL 194
S+PP Y+W + + F I ++ +H GLY C NSAT S +L
Sbjct: 186 TFLAETKSHPPCAYTWFLLDSILSHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTL 245
Query: 195 TIRVI 199
+RV+
Sbjct: 246 KVRVL 250
>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
7 [Homo sapiens]
Length = 265
Score = 113 bits (282), Expect = 1e-25
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E PKPSI+S+N NP E + V+LTC PET + +YLWW+N QSL ++ R+ LS NRTL L
Sbjct: 144 EPPKPSITSNNFNPVENKDIVVLTCQPETQNTTYLWWVNNQSLLVSPRLLLSTDNRTLVL 203
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNL 113
TK GPYECEI N ASRSDPVTLN+
Sbjct: 204 LSATKNDIGPYECEIQNPVGASRSDPVTLNV 234
Score = 32.3 bits (72), Expect = 0.31
Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 50/241 (20%)
Query: 1 MGPLSAPPCTEHIKWKGLLLTVET----PKPSISSSNL-----NPREAMETVILTCNPET 51
MG SA P I W+GLLLT P+ + +N+ N E E +++ N
Sbjct: 1 MGSPSACPYRVCIPWQGLLLTASLLTFWNLPNSAQTNIDVVPFNVAEGKEVLLVVHNESQ 60
Query: 52 PDASYLWWMNGQSLPMTHRM-----QLSETNR---------------TLFLFGVTKYTAG 91
Y W+ G+ + +R+ +S+ N TL + VT AG
Sbjct: 61 NLYGYNWY-KGERVHANYRIIGYVKNISQENAPGPAHNGRETIYPNGTLLIQNVTHNDAG 119
Query: 92 PYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTS--YYSGENLDLSCFANSNPPAQ- 148
Y + ++ VT + P+ PS+TS + EN D+ P Q
Sbjct: 120 FYTLHVIKENLV--NEEVTRQFYVFSEPPK--PSITSNNFNPVENKDI-VVLTCQPETQN 174
Query: 149 --YSWTINGKFQLSGQKLFIP---------QITPKHNGLYACSARNSATGEESSTSLTIR 197
Y W +N + L +L + T G Y C +N G S +T+
Sbjct: 175 TTYLWWVNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQN-PVGASRSDPVTLN 233
Query: 198 V 198
V
Sbjct: 234 V 234
>gi|85861202 carcinoembryonic antigen-related cell adhesion molecule
16 [Homo sapiens]
Length = 484
Score = 105 bits (262), Expect = 3e-23
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 26 KPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGV 85
+P++ +++ E +T+ L C+ +P A W+ NG +LP+ R+ LS R L G+
Sbjct: 191 QPTVLANSTALVERRDTLRLMCSSPSPTAEVRWFFNGGALPVALRLGLSPDGRVLARHGI 250
Query: 86 TKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYS-------GENLDLS 138
+ AG Y+CE+WN S SRS+P+ L + GP+ I T+ +L L
Sbjct: 251 RREEAGAYQCEVWNPVSVSRSEPINLTVYFGPERVAILQDSTTRTGCTIKVDFNTSLTLW 310
Query: 139 CFANSNPPAQYSWTINGKFQLSGQ-KLFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
C + S P +Y WT NG+ +GQ L I +T G Y C A+N+ T S S+ ++
Sbjct: 311 CVSRSCPEPEYVWTFNGQALKNGQDHLNISSMTAAQEGTYTCIAKNTKTLLSGSASVVVK 370
Query: 198 VIA 200
+ A
Sbjct: 371 LSA 373
>gi|156564390 carcinoembryonic antigen-related cell adhesion
molecule 20 4L [Homo sapiens]
Length = 503
Score = 81.6 bits (200), Expect = 4e-16
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E KPSI+ S E + V C + + + W N S+ RMQLS+ + L +
Sbjct: 66 ELAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTI 125
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENL 135
V + +G Y+CE ++ + RSDP+ L++ +GPD I V G ++
Sbjct: 126 LIVQREDSGTYQCEARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVVEVMEGSSM 185
Query: 136 DLSCFANSNPPAQYSWTINGKFQLSGQKLF-IPQITPKHNGLYACSARNSATGEESSTSL 194
S+PP Y+W + + F I ++ +H GLY C NSAT S +L
Sbjct: 186 TFLAETKSHPPCAYTWFLLDSILSHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTL 245
Query: 195 TIRVI 199
+RV+
Sbjct: 246 KVRVL 250
Score = 73.9 bits (180), Expect = 9e-14
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 27 PSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVT 86
P + S+LN E +V LTC + W+++GQ L + +QLS NRTL + G+
Sbjct: 256 PQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQ 315
Query: 87 KYTAGPYECEIWNSGSASRSDPVTLNL 113
+ GPY CE+WN GS +RS+P+ L +
Sbjct: 316 RNDTGPYACEVWNWGSRARSEPLELTI 342
>gi|156564388 carcinoembryonic antigen-related cell adhesion
molecule 20 4S [Homo sapiens]
Length = 491
Score = 81.6 bits (200), Expect = 4e-16
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 23 ETPKPSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
E KPSI+ S E + V C + + + W N S+ RMQLS+ + L +
Sbjct: 66 ELAKPSIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSVVFHERMQLSKDGKILTI 125
Query: 83 FGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI-------FPSVTSYYSGENL 135
V + +G Y+CE ++ + RSDP+ L++ +GPD I V G ++
Sbjct: 126 LIVQREDSGTYQCEARDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVVEVMEGSSM 185
Query: 136 DLSCFANSNPPAQYSWTINGKFQLSGQKLF-IPQITPKHNGLYACSARNSATGEESSTSL 194
S+PP Y+W + + F I ++ +H GLY C NSAT S +L
Sbjct: 186 TFLAETKSHPPCAYTWFLLDSILSHTTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTL 245
Query: 195 TIRVI 199
+RV+
Sbjct: 246 KVRVL 250
Score = 73.9 bits (180), Expect = 9e-14
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 27 PSISSSNLNPREAMETVILTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVT 86
P + S+LN E +V LTC + W+++GQ L + +QLS NRTL + G+
Sbjct: 256 PQVVPSSLNLVENARSVDLTCQTVNQSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQ 315
Query: 87 KYTAGPYECEIWNSGSASRSDPVTLNL 113
+ GPY CE+WN GS +RS+P+ L +
Sbjct: 316 RNDTGPYACEVWNWGSRARSEPLELTI 342
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 72.0 bits (175), Expect = 3e-13
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 24 TPKPSISSSNLNPREAM----ETVILTCNPETPDASYL---WWMNGQSLPMTHRMQLSET 76
TPK I + P +A+ ++V +TC + + Y W +G SL +
Sbjct: 241 TPKLEIK---VTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLK-------KQN 290
Query: 77 NRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLD 136
TL L VTK +G Y C++ N RS+ V L + + P+ + + G ++
Sbjct: 291 TFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQYAPEPSTVQILHSPAVEGSQVE 350
Query: 137 LSCFANSNP-PAQYSWTINGKFQLSG---QKLFIPQITPKHNGLYACSARNSATGEESST 192
C + +NP P Y+W NGK ++ G +K+ IP+I P H G Y+C A N +
Sbjct: 351 FLCMSLANPLPTNYTWYHNGK-EMQGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGP 409
Query: 193 SLTIRVIAPPGLGTFAFNNP 212
+ V PP T NP
Sbjct: 410 GAELDVQYPPKKVTTVIQNP 429
Score = 53.9 bits (128), Expect = 1e-07
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 28/199 (14%)
Query: 17 GLLLTVETPKPSISSSNLNPREAME--TVILTCNPETPDAS---YLWWMNGQ----SLPM 67
G L V+ P +++ NP E TV L+CN + + S Y W +G SL +
Sbjct: 410 GAELDVQYPPKKVTTVIQNPMPIREGDTVTLSCNYNSSNPSVTRYEWKPHGAWEEPSLGV 469
Query: 68 THRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPRI--FPS 125
+ N T+ C W S + PV LN+ + P R+
Sbjct: 470 LKIQNVGWDNTTIACAA----------CNSW----CSWASPVALNVQYAPRDVRVRKIKP 515
Query: 126 VTSYYSGENLDLSC-FANSNPP-AQYSWTINGKFQLSGQKLFIPQITPKHNGLYACSARN 183
++ +SG ++ L C F++S+P Q+ W NG+ +L I+P+ G Y+C N
Sbjct: 516 LSEIHSGNSVSLQCDFSSSHPKEVQFFWEKNGRLLGKESQLNFDSISPEDAGSYSCWVNN 575
Query: 184 SATGEESSTSLTIRVIAPP 202
S G+ +S + T+ V+ P
Sbjct: 576 S-IGQTASKAWTLEVLYAP 593
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 53 DASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLN 112
+ + W NG+ L ++ ++ AG Y C + NS + S TL
Sbjct: 538 EVQFFWEKNGRLLGKESQLNFDS---------ISPEDAGSYSCWVNNSIGQTASKAWTLE 588
Query: 113 LLHGPDLPRIFPSV-TSYYSGENLDLSCFANSNPP-AQYSWTI--NGKFQLSGQKLFIPQ 168
+L+ P R+ S G++ L+C +++NPP + Y+W N QKL +
Sbjct: 589 VLYAPRRLRVSMSPGDQVMEGKSATLTCESDANPPVSHYTWFDWNNQSLPYHSQKLRLEP 648
Query: 169 ITPKHNGLYACSARNSATGEESSTSLTIRVIAPPGLG 205
+ +H+G Y C NS S S +P +G
Sbjct: 649 VKVQHSGAYWCQGTNSVGKGRSPLSTLTVYYSPETIG 685
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 68.9 bits (167), Expect = 3e-12
Identities = 61/188 (32%), Positives = 82/188 (43%), Gaps = 19/188 (10%)
Query: 24 TPKPSISSSNLNPREAMETVILTCNPE-TPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
TP I SS+ E +T+ L C A W G SLP H++ S L L
Sbjct: 2436 TPTVRIESSSSQVAEG-QTLDLNCLVAGQAHAQVTWHKRGGSLPARHQVHGSR----LRL 2490
Query: 83 FGVTKYTAGPYECEI-WNSGSASRSDPVTLNLL------HGPDLP-RIFPSVTSYYSGEN 134
VT +G Y C + +SG+ S VT+ G P RI S S +G
Sbjct: 2491 LQVTPADSGEYVCRVVGSSGTQEASVLVTIQQRLSGSHSQGVAYPVRIESSSASLANGHT 2550
Query: 135 LDLSCFANSNPPAQYSWTING-----KFQLSGQKLFIPQITPKHNGLYACSARNSATGEE 189
LDL+C S P +W G + Q+ G +L IPQ+TP +G Y C N A E
Sbjct: 2551 LDLNCLVASQAPHTITWYKRGGSLPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRE 2610
Query: 190 SSTSLTIR 197
+S +TI+
Sbjct: 2611 TSLIVTIQ 2618
Score = 62.4 bits (150), Expect = 3e-10
Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 18 LLLTVET-------PKPSISSSNLNPREAMETVILTCNPE-TPDASYLWWMNGQSLPMTH 69
+L+T+E P I SS+ E +T+ L+C A W+ G SLP H
Sbjct: 2231 VLVTIEASVIPGPIPPVRIESSSSTVAEG-QTLDLSCVVAGQAHAQVTWYKRGGSLPARH 2289
Query: 70 RMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVT----LNLLH--GPDLP-RI 122
+++ S L++F + AG Y C N AS + VT NL + G P RI
Sbjct: 2290 QVRGSR----LYIFQASPADAGQYVCRASNGMEASITVTVTGTQGANLAYPAGSTQPIRI 2345
Query: 123 FPSVTSYYSGENLDLSCFANSNPPAQYSWTING-----KFQLSGQKLFIPQITPKHNGLY 177
PS + G+ LDL+C AQ +W G + Q G L + Q +P +G Y
Sbjct: 2346 EPSSSQVAEGQTLDLNCVVPGQSHAQVTWHKRGGSLPVRHQTHGSLLRLYQASPADSGEY 2405
Query: 178 ACSARNSATGEESSTSLTIRVI-APPGLG 205
C S+ E+S +TI + P LG
Sbjct: 2406 VCRVLGSSVPLEASVLVTIEPAGSVPALG 2434
Score = 61.2 bits (147), Expect = 6e-10
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 39 AMETVILTCNPE-TPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEI 97
A TV L C P A+ W G SLP R + ++ TL + +T AG Y C
Sbjct: 1969 AGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTDI-ATLLIPAITTADAGFYLCVA 2027
Query: 98 WN-SGSA-SRSDPVTLNLLHGPDLP-RIFPSVTSYYSGENLDLSCFANSNPPAQYSWTIN 154
+ +G+A +R V L+ P +I S S G+ LDL+C + AQ +W
Sbjct: 2028 TSPAGTAQARIQVVVLSASDASPPPVKIESSSPSVTEGQTLDLNCVVAGSAHAQVTWYRR 2087
Query: 155 G-----KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTI 196
G Q+ G +L +PQ++P +G Y C N + +E+S ++++
Sbjct: 2088 GGSLPPHTQVHGSRLRLPQVSPADSGEYVCRVENGSGPKEASITVSV 2134
Score = 61.2 bits (147), Expect = 6e-10
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 25 PKPSISSSNLNPREAMETVILTCNPE-TPDASYLWWMNGQSLPMTHRMQLSETNRTLFLF 83
P I SS+ + E +T+ L C + A W+ G SLP ++ S L L
Sbjct: 2051 PPVKIESSSPSVTEG-QTLDLNCVVAGSAHAQVTWYRRGGSLPPHTQVHGSR----LRLP 2105
Query: 84 GVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPD-------LP------RIFPSVTSYY 130
V+ +G Y C + N GS + +T+++LHG +P RI PS +
Sbjct: 2106 QVSPADSGEYVCRVEN-GSGPKEASITVSVLHGTHSGPSYTPVPGSTRPIRIEPSSSHVA 2164
Query: 131 SGENLDLSCFANSNPPAQYSWTING-----KFQLSGQKLFIPQITPKHNGLYACSARNSA 185
G+ LDL+C AQ +W G + Q G L + Q+TP +G Y C ++
Sbjct: 2165 EGQTLDLNCVVPGQAHAQVTWHKRGGSLPARHQTHGSLLRLHQVTPADSGEYVCHVVGTS 2224
Query: 186 TGEESSTSLTIRVIAPPG 203
E+S +TI PG
Sbjct: 2225 GPLEASVLVTIEASVIPG 2242
Score = 60.8 bits (146), Expect = 8e-10
Identities = 59/198 (29%), Positives = 82/198 (41%), Gaps = 27/198 (13%)
Query: 29 ISSSNLNPREAMETVILTCN-PETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTK 87
I SS+ + E ET+ L C P A W G SLP H+ + S L L V+
Sbjct: 2731 IESSSSHVAEG-ETLDLNCVVPGQAHAQVTWHKRGGSLPSHHQTRGSR----LRLHHVSP 2785
Query: 88 YTAGPYECEIWNSGS-----------ASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLD 136
+G Y C + S AS S V + G RI PS + G+ LD
Sbjct: 2786 ADSGEYVCRVMGSSGPLEASVLVTIEASGSSAVHVPAPGGAPPIRIEPSSSRVAEGQTLD 2845
Query: 137 LSCFANSNPPAQYSWTING-----KFQLSGQKLFIPQITPKHNGLYACSARNSATGEESS 191
L C AQ +W G + Q+ G L + Q++P +G Y+C S+ E+S
Sbjct: 2846 LKCVVPGQAHAQVTWHKRGGNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLEAS 2905
Query: 192 TSLTIRVIAP-----PGL 204
+TI +P PGL
Sbjct: 2906 VLVTIEPSSPGPIPAPGL 2923
Score = 58.9 bits (141), Expect = 3e-09
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 38 EAMETVILTCNPETPDASYLWWMNGQS-LPMTHRMQLSETNRTLFLFGVTKYTAGPYECE 96
EA T L C+ A + W +S LP HR++ TL + V + +G Y C
Sbjct: 3224 EAGHTATLRCSATGSPAPTIHWSKLRSPLPWQHRLE----GDTLIIPRVAQQDSGQYICN 3279
Query: 97 IWNSGSASRSDPVTLNLLHGPDLPRIFPSVTSYYSGENLDLSCFANSNPPAQYSW----- 151
+ A ++ + + P P S +GE + L C A+ PP + W
Sbjct: 3280 A--TSPAGHAEATIILHVESPPYATTVPEHASVQAGETVQLQCLAHGTPPLTFQWSRVGS 3337
Query: 152 TINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPPG 203
++ G+ + L + P+ +G Y C N E+ L ++ PPG
Sbjct: 3338 SLPGRATARNELLHFERAAPEDSGRYRCRVTNKVGSAEAFAQLLVQ--GPPG 3387
Score = 52.0 bits (123), Expect = 4e-07
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 41 ETVILTCN-PETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIW- 98
+T+ L C P A W G +LP H++ L L V+ +G Y C++
Sbjct: 2842 QTLDLKCVVPGQAHAQVTWHKRGGNLPARHQVH----GPLLRLNQVSPADSGEYSCQVTG 2897
Query: 99 NSGSASRSDPVTLNLLHGPDLPR--------IFPSVTSYYSGENLDLSCFANSNPPAQYS 150
+SG+ S VT+ +P I S + G+ LDL+C AQ +
Sbjct: 2898 SSGTLEASVLVTIEPSSPGPIPAPGLAQPIYIEASSSHVTEGQTLDLNCVVPGQAHAQVT 2957
Query: 151 W-----TINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPPGLG 205
W ++ + Q G +L + ++P +G Y C A S G E S T+ V PP G
Sbjct: 2958 WYKRGGSLPARHQTHGSQLRLHLVSPADSGEYVCRAA-SGPGPEQEASFTVTV--PPSEG 3014
Query: 206 T 206
+
Sbjct: 3015 S 3015
Score = 50.4 bits (119), Expect = 1e-06
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 19/187 (10%)
Query: 24 TPKPSISSSNLNPREAMETVILTCN-PETPDASYLWWMNGQSLPMTHRMQLSETNRTLFL 82
+P I SS+ E +T+ L C P A W+ G SLP H+ S L L
Sbjct: 2629 SPPIRIESSSPTVVEG-QTLDLNCVVARQPQAIITWYKRGGSLPSRHQTHGSH----LRL 2683
Query: 83 FGVTKYTAGPYECEIWNSGSA-------SRSDPVTLNLLHGPDLP-RIFPSVTSYYSGEN 134
++ +G Y C N+ A S S G +P RI S + GE
Sbjct: 2684 HQMSVADSGEYVCRANNNIDALEASIVISVSPSAGSPSAPGSSMPIRIESSSSHVAEGET 2743
Query: 135 LDLSCFANSNPPAQYSW-----TINGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEE 189
LDL+C AQ +W ++ Q G +L + ++P +G Y C S+ E
Sbjct: 2744 LDLNCVVPGQAHAQVTWHKRGGSLPSHHQTRGSRLRLHHVSPADSGEYVCRVMGSSGPLE 2803
Query: 190 SSTSLTI 196
+S +TI
Sbjct: 2804 ASVLVTI 2810
Score = 41.6 bits (96), Expect = 5e-04
Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 21/188 (11%)
Query: 9 CTEHIKWKGLLLTVETPKPSISSSNLNPREAMETVILTCNPE-------TPDASYLWWMN 61
C H W + + ++ S +N R +++TV++ E P W
Sbjct: 3466 CQAHGPWGKAQASAQLVIQALPSVLINIRTSVQTVVVGHAVEFECLALGDPKPQVTWSKV 3525
Query: 62 GQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSASRSDPVTLNLLHGPDLPR 121
G L R + ++ + + V AG Y C N+ ++S LL LP+
Sbjct: 3526 GGHL----RPGIVQSGGVVRIAHVELADAGQYRCTATNAAGTTQSHV----LLLVQALPQ 3577
Query: 122 I-FPSVTSYYSGENLDLSCFANSNPPAQYSWT-INGKF----QLSGQKLFIPQITPKHNG 175
I P +G C A+ P SW+ ++G +L L +P + P+ G
Sbjct: 3578 ISMPQEVRVPAGSAAVFPCIASGYPTPDISWSKLDGSLPPDSRLENNMLMLPSVRPQDAG 3637
Query: 176 LYACSARN 183
Y C+A N
Sbjct: 3638 TYVCTATN 3645
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 58 WWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNS-GSASRSDPVTLNLLHG 116
W+ G LP H +Q + L + + + G Y C+ G A S + + L
Sbjct: 3433 WFKEGGQLPPGHSVQ----DGVLRIQNLDQSCQGTYICQAHGPWGKAQASAQLVIQALPS 3488
Query: 117 PDLPRIFPSVTSYYSGENLDLSCFANSNPPAQYSWT-INGKFQ----LSGQKLFIPQITP 171
L I SV + G ++ C A +P Q +W+ + G + SG + I +
Sbjct: 3489 V-LINIRTSVQTVVVGHAVEFECLALGDPKPQVTWSKVGGHLRPGIVQSGGVVRIAHVEL 3547
Query: 172 KHNGLYACSARNSATGEESSTSLTIRVI 199
G Y C+A N+A +S L ++ +
Sbjct: 3548 ADAGQYRCTATNAAGTTQSHVLLLVQAL 3575
Score = 33.9 bits (76), Expect = 0.11
Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 25/180 (13%)
Query: 41 ETVILTCN-PETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWN 99
+T+ L C P A W+ G SLP H+ S+ L L V+ +G Y C +
Sbjct: 2940 QTLDLNCVVPGQAHAQVTWYKRGGSLPARHQTHGSQ----LRLHLVSPADSGEYVCRAAS 2995
Query: 100 SGSASRSDPVTLNL---------LHGPDLPRIFPSVTSYYSGENLDLSCFANSNP-PAQY 149
+ T+ + L P + I P ++ G++ C + P
Sbjct: 2996 GPGPEQEASFTVTVPPSEGSSYRLRSPVIS-IDPPSSTVQQGQDASFKCLIHDGAAPISL 3054
Query: 150 SWTI-------NGKFQLSGQKLFIPQITPKHNGLYACSARNSATGEESSTSLTIRVIAPP 202
W N +G + I P ++G Y C A N+ +S +L++ PP
Sbjct: 3055 EWKTRNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVH--GPP 3112
Score = 33.1 bits (74), Expect = 0.18
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 117 PDLPRIFPSVTSYYSGENLDLSCFANSNPPAQYSWTING--------KFQLSGQKLFIPQ 168
P + + P+ + G + L C + +PP + W+ + + G +L P
Sbjct: 1676 PLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSREDGRPVPSGTQQRHQGSELHFPS 1735
Query: 169 ITPKHNGLYACSARNSATGEESSTSLTI 196
+ P G+Y C+ RN S L +
Sbjct: 1736 VQPSDAGVYICTCRNLHQSNTSRAELLV 1763
Score = 31.6 bits (70), Expect = 0.52
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 114 LHGPDLPRI--FPSVTSYYSGENLDLSCFANSNPPAQYSWTINGKF---QLSGQK----- 163
+HG PR+ P T ++G + L C A P A +W G Q ++
Sbjct: 1950 VHGGGGPRVQVSPERTQVHAGRTVRLYCRAAGVPSATITWRKEGGSLPPQARSERTDIAT 2009
Query: 164 LFIPQITPKHNGLYACSARNSA 185
L IP IT G Y C A + A
Sbjct: 2010 LLIPAITTADAGFYLCVATSPA 2031
Score = 28.1 bits (61), Expect = 5.8
Identities = 38/165 (23%), Positives = 53/165 (32%), Gaps = 14/165 (8%)
Query: 45 LTCNPETPDASYLWWMNGQSLPMTHRMQLSETNRTLFLFGVTKYTAGPYECEIWNSGSAS 104
L C Y +W P+ Q L V AG Y C N S
Sbjct: 1696 LRCQVSGSPPHYFYWSREDGRPVPSGTQQRHQGSELHFPSVQPSDAGVYICTCRNL-HQS 1754
Query: 105 RSDPVTLNLLHGPDLPRIFPSVTSYYS-----GENLDLSCFANSNPPA-QYSWT--INGK 156
+ L + P P I +V S G ++ C A S PA WT NGK
Sbjct: 1755 NTSRAELLVTEAPSKP-ITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGK 1813
Query: 157 FQLSGQK----LFIPQITPKHNGLYACSARNSATGEESSTSLTIR 197
L I + G Y C+ N ++ + +L ++
Sbjct: 1814 LPTRAMDFNGILTIRNVQLSDAGTYVCTGSNMFAMDQGTATLHVQ 1858
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,854,056
Number of Sequences: 37866
Number of extensions: 442163
Number of successful extensions: 2468
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 980
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.