Guide to the Human Genome
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Name: KRT85 Sequence: fasta or formatted (507aa) NCBI GI: 4504935
Description:

keratin 85

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         44           2
 C cysteine            5.3         27           2
 D aspartate           3.2         16           2
 E glutamate          10.3         52           3
 F phenylalanine       2.6         13           1
 G glycine             7.1         36           2
 H histidine           0.8          4           1
 I isoleucine          4.5         23           2
 K lysine              4.9         25           3
 L leucine             8.3         42           2
 M methionine          1.4          7           1
 N asparagine          3.9         20           1
 P proline             2.8         14           2
 Q glutamine           3.9         20           2
 R arginine            8.1         41           2
 S serine             10.7         54           3
 T threonine           3.7         19           2
 V valine              6.5         33           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 85 
LOC100293351          0.775   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.775   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.775   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.775   keratin 86 
KRT83                 0.769   keratin 83 
KRT81                 0.764   keratin, hair, basic, 1 
KRT84                 0.562   keratin, hair, basic, 4 
KRT82                 0.549   keratin 82 
KRT75                 0.434   keratin 75 
KRT5                  0.433   keratin 5 
KRT6A                 0.430   keratin 6A 
KRT6C                 0.429   keratin 6C 
KRT6B                 0.426   keratin 6B 
KRT7                  0.410   keratin 7 
KRT8                  0.410   keratin 8 
KRT4                  0.403   keratin 4 
KRT73                 0.403   keratin 73 
KRT3                  0.399   keratin 3 
KRT71                 0.397   keratin 71 
KRT79                 0.387   keratin 6L 
KRT72                 0.386   keratin 72 isoform 1 
KRT72                 0.386   keratin 72 isoform 1 
KRT74                 0.383   keratin 6 irs4 
KRT76                 0.381   keratin 76 
KRT1                  0.377   keratin 1 
KRT2                  0.374   keratin 2 
KRT78                 0.347   keratin 5b 
KRT77                 0.343   keratin 77 
KRT72                 0.329   keratin 72 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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