Guide to the Human Genome
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Name: KRT82 Sequence: fasta or formatted (513aa) NCBI GI: 27477127
Description:

keratin 82

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         37           2
 C cysteine            4.7         24           2
 D aspartate           3.3         17           2
 E glutamate           9.6         49           3
 F phenylalanine       2.5         13           1
 G glycine             8.2         42           3
 H histidine           1.2          6           1
 I isoleucine          4.7         24           2
 K lysine              6.0         31           3
 L leucine            10.7         55           2
 M methionine          1.9         10           1
 N asparagine          4.1         21           2
 P proline             3.5         18           1
 Q glutamine           5.1         26           3
 R arginine            6.4         33           2
 S serine              8.4         43           3
 T threonine           3.5         18           1
 V valine              5.7         29           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin 82 
KRT85                 0.538   keratin 85 
KRT84                 0.518   keratin, hair, basic, 4 
LOC100293351          0.505   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.505   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.505   PREDICTED: hypothetical protein isoform 3 
KRT86                 0.505   keratin 86 
KRT81                 0.503   keratin, hair, basic, 1 
KRT83                 0.495   keratin 83 
KRT5                  0.426   keratin 5 
KRT6A                 0.425   keratin 6A 
KRT75                 0.424   keratin 75 
KRT6C                 0.420   keratin 6C 
KRT6B                 0.419   keratin 6B 
KRT7                  0.401   keratin 7 
KRT8                  0.392   keratin 8 
KRT73                 0.389   keratin 73 
KRT71                 0.388   keratin 71 
KRT79                 0.383   keratin 6L 
KRT3                  0.383   keratin 3 
KRT72                 0.380   keratin 72 isoform 1 
KRT72                 0.380   keratin 72 isoform 1 
KRT1                  0.380   keratin 1 
KRT74                 0.377   keratin 6 irs4 
KRT4                  0.373   keratin 4 
KRT76                 0.369   keratin 76 
KRT2                  0.362   keratin 2 
KRT77                 0.345   keratin 77 
KRT78                 0.327   keratin 5b 
KRT72                 0.318   keratin 72 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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