Guide to the Human Genome
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Name: MYBBP1A Sequence: fasta or formatted (1328aa) NCBI GI: 157694492
Description:

MYB binding protein 1a isoform 2

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [1332aa] MYB binding protein 1a isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2        109           3
 C cysteine            1.3         17           1
 D aspartate           4.2         56           2
 E glutamate           7.2         95           4
 F phenylalanine       3.5         47           2
 G glycine             4.9         65           2
 H histidine           2.6         35           2
 I isoleucine          2.3         31           2
 K lysine              7.6        101           3
 L leucine            14.2        188           4
 M methionine          1.7         23           2
 N asparagine          2.1         28           2
 P proline             6.0         80           2
 Q glutamine           7.5         99           3
 R arginine            6.3         84           2
 S serine              7.5         99           4
 T threonine           5.0         66           2
 V valine              5.9         78           3
 W tryptophan          0.8         11           1
 Y tyrosine            1.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MYB binding protein 1a isoform 2 
MYBBP1A               0.995   MYB binding protein 1a isoform 1 
POLR3GL               0.010   polymerase (RNA) III (DNA directed) polypeptide G (3...
PELP1                 0.009   proline, glutamic acid and leucine rich protein 1 [...
ATRX                  0.009   transcriptional regulator ATRX isoform 2 
ATRX                  0.009   transcriptional regulator ATRX isoform 1 
HIST1H1E              0.009   histone cluster 1, H1e 
SET                   0.009   SET translocation (myeloid leukemia-associated) iso...
SET                   0.009   SET translocation (myeloid leukemia-associated) iso...
MLLT1                 0.009   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
PRG4                  0.009   proteoglycan 4 isoform B 
PRG4                  0.009   proteoglycan 4 isoform A 
SON                   0.009   SON DNA-binding protein isoform F 
SON                   0.009   SON DNA-binding protein isoform B 
EIF5B                 0.008   eukaryotic translation initiation factor 5B 
MLL                   0.008   myeloid/lymphoid or mixed-lineage leukemia protein [...
AP3B1                 0.008   adaptor-related protein complex 3, beta 1 subunit [H...
SRRM1                 0.008   serine/arginine repetitive matrix 1 
ZBTB9                 0.008   zinc finger and BTB domain containing 9 
GPATCH8               0.008   G patch domain containing 8 
YTHDC1                0.008   splicing factor YT521-B isoform 2 
YTHDC1                0.008   splicing factor YT521-B isoform 1 
OGFR                  0.007   opioid growth factor receptor 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 1 
TCHH                  0.007   trichohyalin 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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