Guide to the Human Genome
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Name: POLR3GL Sequence: fasta or formatted (218aa) NCBI GI: 14150064
Description:

polymerase (RNA) III (DNA directed) polypeptide G (32kD) like

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7          8           1
 C cysteine            0.0          0           0
 D aspartate           7.3         16           2
 E glutamate          18.8         41           7
 F phenylalanine       2.8          6           1
 G glycine             7.3         16           3
 H histidine           0.5          1           1
 I isoleucine          4.6         10           1
 K lysine              6.9         15           2
 L leucine             7.8         17           2
 M methionine          2.3          5           1
 N asparagine          2.3          5           1
 P proline             8.7         19           3
 Q glutamine           3.2          7           1
 R arginine            7.8         17           2
 S serine              3.7          8           1
 T threonine           4.1          9           2
 V valine              3.7          8           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polymerase (RNA) III (DNA directed) polypeptide G (3... 
POLR3G                0.429   polymerase (RNA) III (DNA directed) polypeptide G (...
TTBK1                 0.092   tau tubulin kinase 1 
MYST4                 0.083   MYST histone acetyltransferase (monocytic leukemia)...
YTHDC1                0.081   splicing factor YT521-B isoform 2 
YTHDC1                0.081   splicing factor YT521-B isoform 1 
MYT1                  0.081   myelin transcription factor 1 
SHROOM4               0.073   shroom family member 4 
PELP1                 0.073   proline, glutamic acid and leucine rich protein 1 [...
LOC647055             0.071   PREDICTED: similar to hCG1790759 
LOC647055             0.071   PREDICTED: similar to hCG1790759 
LOC647055             0.071   PREDICTED: similar to hCG1790759 
LOC728792             0.071   PREDICTED: hypothetical protein 
TTN                   0.066   titin isoform N2-A 
LOC100289089          0.066   PREDICTED: hypothetical protein XP_002343359 
CALR                  0.066   calreticulin precursor 
WDR87                 0.064   NYD-SP11 protein 
RANGAP1               0.064   Ran GTPase activating protein 1 
MYBBP1A               0.064   MYB binding protein 1a isoform 1 
MYBBP1A               0.064   MYB binding protein 1a isoform 2 
PTMS                  0.064   parathymosin 
DCAF8L2               0.062   DDB1 and CUL4 associated factor 8-like 2 
CHIC1                 0.062   cysteine-rich hydrophobic domain 1 
LOC645490             0.062   PREDICTED: similar to hCG1991922 
MYT1L                 0.062   myelin transcription factor 1-like 
C12orf12              0.062   hypothetical protein LOC196477 
CLSPN                 0.059   claspin 
EHMT2                 0.059   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.059   euchromatic histone-lysine N-methyltransferase 2 is...
C3orf44               0.059   hypothetical protein LOC131831 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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