ATRX 12000

Name: ATRX	Sequence: fasta or formatted (2454aa)		NCBI GI: 20336205
Description: transcriptional regulator ATRX isoform 2		Referenced in: DNases, Recombination, and DNA Repair
Other entries for this name: alt prot [2492aa] transcriptional regulator ATRX isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 101 2 C cysteine 1.8 43 3 D aspartate 7.3 180 6 E glutamate 10.5 257 15 F phenylalanine 2.1 51 1 G glycine 4.8 117 3 H histidine 1.8 44 1 I isoleucine 4.2 104 2 K lysine 11.7 288 5 L leucine 7.1 174 3 M methionine 2.4 58 2 N asparagine 5.0 123 2 P proline 3.5 87 3 Q glutamine 4.7 115 6 R arginine 5.1 125 3 S serine 11.2 275 5 T threonine 5.1 125 2 V valine 4.9 120 2 W tryptophan 0.6 15 1 Y tyrosine 2.1 52 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcriptional regulator ATRX isoform 2 ATRX 0.996 transcriptional regulator ATRX isoform 1 RAD54L2 0.099 RAD54-like 2 RAD54L 0.029 RAD54-like protein RAD54L 0.029 RAD54-like protein ERCC6 0.023 excision repair cross-complementing rodent repair def... DSPP 0.023 dentin sialophosphoprotein preproprotein RAD54B 0.023 RAD54 homolog B SRCAP 0.022 Snf2-related CBP activator protein ERCC6L 0.021 excision repair protein ERCC6-like RSF1 0.021 remodeling and spacing factor 1 C9orf102 0.020 RAD26L hypothetical protein EIF5B 0.020 eukaryotic translation initiation factor 5B CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.020 chromodomain helicase DNA binding protein 3 isoform... SMARCA1 0.020 SWI/SNF-related matrix-associated actin-dependent r... SMARCA5 0.019 SWI/SNF-related matrix-associated actin-dependent re... HELLS 0.019 helicase, lymphoid-specific CHD2 0.019 chromodomain helicase DNA binding protein 2 isoform... SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... ANKRD11 0.019 ankyrin repeat domain 11 CHD4 0.018 chromodomain helicase DNA binding protein 4 INO80 0.018 INO80 complex homolog 1 CHD1 0.018 chromodomain helicase DNA binding protein 1 RPGR 0.018 retinitis pigmentosa GTPase regulator isoform C [Hom... CHD5 0.018 chromodomain helicase DNA binding protein 5 SMARCA1 0.018 SWI/SNF-related matrix-associated actin-dependent re... BOD1L 0.018 biorientation of chromosomes in cell division 1-like... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.