Guide to the Human Genome
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Name: ZBTB9 Sequence: fasta or formatted (473aa) NCBI GI: 23308693
Description:

zinc finger and BTB domain containing 9

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         33           3
 C cysteine            2.5         12           1
 D aspartate           3.4         16           4
 E glutamate           7.8         37           8
 F phenylalanine       3.6         17           1
 G glycine            11.8         56           4
 H histidine           4.2         20           2
 I isoleucine          3.0         14           1
 K lysine              4.4         21           1
 L leucine            10.6         50           3
 M methionine          1.1          5           1
 N asparagine          1.3          6           1
 P proline            10.1         48           2
 Q glutamine           4.0         19           1
 R arginine            5.3         25           2
 S serine              8.0         38           3
 T threonine           5.5         26           2
 V valine              4.2         20           2
 W tryptophan          1.1          5           1
 Y tyrosine            1.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 9 
ZBTB22                0.216   zinc finger and BTB domain containing 22 
ZBTB22                0.216   zinc finger and BTB domain containing 22 
ZBTB43                0.104   zinc finger and BTB domain containing 43 
ZBTB43                0.104   zinc finger and BTB domain containing 43 
ZBTB12                0.097   zinc finger and BTB domain containing 12 
ZBTB45                0.091   zinc finger and BTB domain containing 45 
ZBTB34                0.087   zinc finger and BTB domain containing 34 
ZBTB17                0.084   zinc finger and BTB domain containing 17 
BCL6B                 0.083   B-cell CLL/lymphoma 6, member B (zinc finger protein...
ZBTB37                0.079   zinc finger and BTB domain containing 37 isoform a ...
ZBTB37                0.079   zinc finger and BTB domain containing 37 isoform b [...
NACC1                 0.075   transcriptional repressor NAC1 
ZBTB42                0.075   zinc finger and BTB domain containing 42 
ZBTB20                0.070   zinc finger and BTB domain containing 20 
ZBTB3                 0.066   zinc finger and BTB domain containing 3 
ZBTB33                0.063   kaiso 
ZBTB7B                0.059   zinc finger and BTB domain containing 7B 
LOC100293130          0.059   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.059   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.059   PREDICTED: similar to kruppel-related zinc finger p...
ZBTB26                0.058   zinc finger and BTB domain containing 26 
ZBTB7A                0.057   zinc finger and BTB domain containing 7A 
ZBTB7C                0.057   zinc finger and BTB domain containing 7C 
HIC1                  0.055   hypermethylated in cancer 1 isoform 2 
HIC1                  0.055   hypermethylated in cancer 1 isoform 1 
HIC2                  0.054   hypermethylated in cancer 2 
ZBTB8B                0.054   zinc finger and BTB domain containing 8B 
ZNF238                0.054   zinc finger protein 238 isoform 2 
ZNF238                0.054   zinc finger protein 238 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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