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Search of human proteins with 156231047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens] 441 e-124
gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens] 441 e-124
gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens] 441 e-124
gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens] 233 1e-61
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 77 8e-15
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 77 8e-15
gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens] 69 2e-12
gi|7657496 RAB guanine nucleotide exchange factor (GEF) 1 [Homo ... 45 4e-05
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 41 7e-04
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 38 0.007
gi|186659512 calmodulin regulated spectrin-associated protein 1 ... 37 0.010
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.010
gi|14149902 hypothetical protein LOC84167 [Homo sapiens] 37 0.012
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 37 0.016
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 37 0.016
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 37 0.016
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 37 0.016
gi|91982772 mucin 17 [Homo sapiens] 36 0.028
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 36 0.028
gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 36 0.028
gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 36 0.028
gi|18702331 OTU domain containing 7A [Homo sapiens] 35 0.036
gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo ... 35 0.047
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 35 0.047
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 35 0.047
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 35 0.062
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 35 0.062
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 34 0.081
gi|197245440 hypothetical protein LOC23285 [Homo sapiens] 34 0.081
gi|24308227 zinc finger protein 687 [Homo sapiens] 34 0.081
>gi|156231049 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 441 bits (1134), Expect = e-124
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
Query: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
Sbjct: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
Query: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
Sbjct: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
Query: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
Sbjct: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|156231047 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 441 bits (1134), Expect = e-124
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
Query: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
Sbjct: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
Query: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
Sbjct: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
Query: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
Sbjct: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|5174755 zinc finger, AN1-type domain 5 [Homo sapiens]
Length = 213
Score = 441 bits (1134), Expect = e-124
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT
Sbjct: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPT 60
Query: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS
Sbjct: 61 SDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVS 120
Query: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY
Sbjct: 121 EPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRY 180
Query: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI
Sbjct: 181 SDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
>gi|21359918 zinc finger, AN1-type domain 6 [Homo sapiens]
Length = 208
Score = 233 bits (593), Expect = 1e-61
Identities = 125/215 (58%), Positives = 149/215 (69%), Gaps = 9/215 (4%)
Query: 1 MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS-GRMSPMGTASGSNSP 59
MAQETN + PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ +S GR+SP T S S
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAT---SVSS 57
Query: 60 TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKT-E 118
S+S VQ D S+ + A STS + PV+ + + ++ S+ D + K
Sbjct: 58 LSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSE--SVASSQLDSTSVDKAVP 115
Query: 119 VSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLH 178
+E V S + QPS QS K+ E PK KKNRCFMCRKKVGLTGF+CRCGN++CG+H
Sbjct: 116 ETEDVQASVSDTAQQPSEEQS--KSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVH 173
Query: 179 RYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213
RYSD HNC Y+YKA+AA KIRKENPVVV EKIQ+I
Sbjct: 174 RYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208
>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 77.4 bits (189), Expect = 8e-15
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 142 KAPELPKPKK-NRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIR 199
KAP K K N CF+C KK GL + ++CRCGN FC HRY++ H C YDYK+ +
Sbjct: 654 KAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLH 713
Query: 200 KENPVVVAEKIQRI 213
+ NPVV A K+ +I
Sbjct: 714 EANPVVNAPKLPKI 727
>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 77.4 bits (189), Expect = 8e-15
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 142 KAPELPKPKK-NRCFMCRKKVGL-TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIR 199
KAP K K N CF+C KK GL + ++CRCGN FC HRY++ H C YDYK+ +
Sbjct: 654 KAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLH 713
Query: 200 KENPVVVAEKIQRI 213
+ NPVV A K+ +I
Sbjct: 714 EANPVVNAPKLPKI 727
>gi|11345484 zinc finger, AN1-type domain 3 [Homo sapiens]
Length = 227
Score = 69.3 bits (168), Expect = 2e-12
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 42/208 (20%)
Query: 18 CGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCE 77
CGF+G+ +T +CS C+ + ++Q + S ++ S S TS NN
Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDD--------SAPSTSNSQSDLFSEETTSDNN-- 69
Query: 78 GAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTS 137
+TS + + + P+ ++ S S+E+ P T+ + + P+ S + S
Sbjct: 70 ----NTSITTPTLSPSQQPLPTELNVTSPSKEE--CGPCTDTAHVSLITPTKR-SCGTDS 122
Query: 138 QSEEKAPELPKPK------------------KNRCFMCRKKVGLTGFD---CRCGNLFCG 176
QSE +A + +P+ + RCF C+ K+ L + CRCG +FC
Sbjct: 123 QSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCM 182
Query: 177 LHRYSDKHNCPYDY----KAEAAAKIRK 200
LHR ++H+C +D+ + EA K+ K
Sbjct: 183 LHRLPEQHDCTFDHMGRGREEAIMKMVK 210
>gi|7657496 RAB guanine nucleotide exchange factor (GEF) 1 [Homo
sapiens]
Length = 491
Score = 45.4 bits (106), Expect = 4e-05
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 12 MLCSTGCGFYGNPRTNGMCSVCYKE--HLQRQQN-------SGRMSPMGTASGSNSPTSD 62
+LC GCG+YGNP G CS C++E H RQ+ + R+ + ++S +S
Sbjct: 17 LLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAFASSQSSQ 76
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEP 122
A SL + T+EK+R V + S ++ + K E+ E
Sbjct: 77 GAQ------SLTFSKFEEKKTNEKTRKVTT---------VKKFFSASSRVGS-KKEIQE- 119
Query: 123 VVTQPSPSVSQPSTSQSEEKAPE 145
PSPS+++ ++ +++ + E
Sbjct: 120 -AKAPSPSINRQTSIETDRVSKE 141
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 41.2 bits (95), Expect = 7e-04
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 18 CGFYGNPRTNGMCSVCYKEHLQRQQ 42
C FYG+P TN CS CY+E L+R++
Sbjct: 807 CSFYGHPETNNFCSCCYREELRRRE 831
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 37.7 bits (86), Expect = 0.007
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 40 RQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQ 99
R + S RM+P S + P +++ Q T + T+ S P +P
Sbjct: 1108 RTRKSSRMTPFPATSAAPEPHPSTSTAQPV-TPKPTSQATRSRTNRSSVKTPEPVVPTAP 1166
Query: 100 QMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKP 149
++ P T +PV ++P+ V++ S+S K PE P
Sbjct: 1167 ELQ------------PSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVP 1204
Score = 31.6 bits (70), Expect = 0.52
Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVT----------QQMTEMSISREDKI 112
SAS + TS G + S P +P Q +T SR +
Sbjct: 1499 SASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRG 1558
Query: 113 TTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKV 161
T ++ V P P QPSTS+++ PE P + RC R V
Sbjct: 1559 RTNRSSVKTPESIVPIAPELQPSTSRNQLVTPE-PTSRATRCRTNRSSV 1606
Score = 31.2 bits (69), Expect = 0.68
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 47 MSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI 106
++P T+ + S T+ S SV+ +T + STS P T+ T MS
Sbjct: 1301 VTPKPTSRTTRSRTNMS-SVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSS 1359
Query: 107 SREDKITTP-------KTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKP 149
+ + T P T +PV +P+ ++ ++S K PE P
Sbjct: 1360 VKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVP 1409
Score = 30.4 bits (67), Expect = 1.2
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 12/87 (13%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEP 122
S S + T + G T+ S P +P ++ P T +P
Sbjct: 1417 STSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQ------------PSTSTDQP 1464
Query: 123 VVTQPSPSVSQPSTSQSEEKAPELPKP 149
V +P+ ++ T +S K PE P
Sbjct: 1465 VTPEPTSQATRGRTDRSSVKTPETVVP 1491
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 68 RADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQP 127
R D S E S E P + +MT + P T ++PV +P
Sbjct: 1082 RQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKP 1141
Query: 128 SPSVSQPSTSQSEEKAPE 145
+ ++ T++S K PE
Sbjct: 1142 TSQATRSRTNRSSVKTPE 1159
Score = 28.5 bits (62), Expect = 4.4
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEP 122
S S R TS + G + S P +P ++ P T +P
Sbjct: 1212 STSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQ------------PSTSTDQP 1259
Query: 123 VVTQPSPSVSQPSTSQSEEKAPE 145
V ++P+ ++ ++S K PE
Sbjct: 1260 VTSEPTYQATRGRKNRSSVKTPE 1282
Score = 28.1 bits (61), Expect = 5.8
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEP 122
S S + TS + G + S P +P ++ P T P
Sbjct: 1253 STSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPELR------------PSTSTDRP 1300
Query: 123 VVTQPSPSVSQPSTSQSEEKAPELPKP 149
V +P+ ++ T+ S K PE P
Sbjct: 1301 VTPKPTSRTTRSRTNMSSVKTPETVVP 1327
Score = 28.1 bits (61), Expect = 5.8
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 12/87 (13%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEP 122
S S ++ T G + S P +P ++ P T +P
Sbjct: 1376 STSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKLE------------PSTSTDQP 1423
Query: 123 VVTQPSPSVSQPSTSQSEEKAPELPKP 149
V +P+ ++ T++S K PE P
Sbjct: 1424 VTPEPTSQATRGRTNRSSVKTPETVVP 1450
Score = 27.7 bits (60), Expect = 7.6
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTE---- 118
S S + T + G T S P +P ++ + S S + +T+ T
Sbjct: 1458 STSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPEL-QASASTDQPVTSEPTSRTTR 1516
Query: 119 -------VSEPVVTQPSPSVSQPSTSQSEEKAPE 145
V P P+ QPSTS + PE
Sbjct: 1517 GRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPE 1550
Score = 27.7 bits (60), Expect = 7.6
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVT----------QQMTEMSISREDKI 112
S S + T G T+ S P + +P+ Q +T SR +
Sbjct: 1540 STSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRC 1599
Query: 113 TTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPEL 146
T ++ V P P+ P+TS + P+L
Sbjct: 1600 RTNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKL 1633
>gi|186659512 calmodulin regulated spectrin-associated protein 1
[Homo sapiens]
Length = 1602
Score = 37.4 bits (85), Expect = 0.010
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 12/136 (8%)
Query: 35 KEHLQRQQNSGRMSP-MGTASGSNSPTSDSASV------QRADTSLNNCEGAAGSTSEKS 87
KEH + SGR SP + TAS +S + S SV +R LN+CE STS
Sbjct: 780 KEHEDKDDASGRSSPCLSTASQMSSVSMASGSVKMTSFAERKLQRLNSCE-TKSSTSSSQ 838
Query: 88 RNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELP 147
+ P A+ +T RE +P +P S V + + +A E
Sbjct: 839 KTTPDASESCPAPLTTWRQKREQ---SPSQHGKDPASLLASELVQLHMQLEEKRRAIEAQ 895
Query: 148 KPKKNRCFMCRKKVGL 163
K KK R+++ L
Sbjct: 896 K-KKMEALSARQRLKL 910
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.4 bits (85), Expect = 0.010
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
SP G + SP S ++A + EGAA T K P A PV+ + + +
Sbjct: 1397 SPKGDPT---SPAVIPLSPKKAPATPVTREGAA--TPSKGDLTPPAVTPVSLKKAPATSA 1451
Query: 108 REDKITTP--KTEVSEPVVTQPSP----SVSQPSTSQSEEKAPELPKP 149
+ TP K + + P VT PSP + Q +TS S +KAP P P
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP 1499
Score = 28.1 bits (61), Expect = 5.8
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 15/76 (19%)
Query: 79 AAGSTSEKSRNVPVAALPVTQQMT----EMSISREDKITTPKTEVSEPVVTQPSPSVSQP 134
A + S K + P A P T + E+ I +PK + P VT PSP
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSP----- 1624
Query: 135 STSQSEEKAPELPKPK 150
EK P P PK
Sbjct: 1625 ------EKGPATPAPK 1634
>gi|14149902 hypothetical protein LOC84167 [Homo sapiens]
Length = 657
Score = 37.0 bits (84), Expect = 0.012
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 35 KEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAA 94
+E QRQ+ +G++ ++G ++P A R+ S A G SE S ++ ++
Sbjct: 384 EESAQRQKTAGKIFRAEASTGQDAPRQAQA---RSWASQGKAASAEGDESEVSEHLSASS 440
Query: 95 LPVTQQMTEMSI---SREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSE 140
QQ + S+ S + T + SE PS + S+P+ E
Sbjct: 441 ASAIQQDSTSSMQPPSEAPMVNTVSSAYSEDFENSPSLTASEPTAHSKE 489
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 36.6 bits (83), Expect = 0.016
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 48 SPMGTASGSNSP-------TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQ 100
+P T S +P T + A + + + A +T++ + P P T +
Sbjct: 248 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 307
Query: 101 MTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
+ +E TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 308 KPAPTTPKEPAPTTPK-EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 354
Score = 32.7 bits (73), Expect = 0.24
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 52 TASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDK 111
T + + T + A E + +T E + P P T + + +E
Sbjct: 392 TTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 451
Query: 112 ITTPKTEVSEPVVTQPSPSV-SQPSTSQSEEKAPELPK 148
TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 452 PTTPK-EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPK 488
Score = 30.0 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 50 MGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISRE 109
M T + + D + T+ +T+EK+ + A T +
Sbjct: 777 MTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTP 836
Query: 110 DKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPK 150
KITT KT P VT ++ +T++ K E KPK
Sbjct: 837 FKITTLKTTTLAPKVTTTKKTI---TTTEIMNKPEETAKPK 874
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
+P T S +P S + + E A + + + P P T + + +
Sbjct: 404 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 463
Query: 108 REDKITTPKTEVSEPVVTQP---SPSVSQPSTSQSEEK----APELPKP 149
++ TTPK EP T P +P+ + T + EK PE P P
Sbjct: 464 KKPAPTTPK----EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 508
Score = 28.9 bits (63), Expect = 3.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPST 136
E A + E + P P T + + +E TTPK EP T P +P+
Sbjct: 513 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPK----EPAP 564
Query: 137 SQSEEKAPELPK 148
+ +E AP PK
Sbjct: 565 TTPKETAPTTPK 576
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVS-QPS 135
E A + E + P P T + T + +E TTPK +P + +P+ + +P+
Sbjct: 553 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK----KPAPKELAPTTTKEPT 608
Query: 136 TSQSEEKAPELPK 148
++ ++ AP PK
Sbjct: 609 STTCDKPAPTTPK 621
Score = 28.1 bits (61), Expect = 5.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 49 PMGTASGSNSPTSDSASVQRADTSLNNC--EGAAGSTSEK-SRNVPVAALPVTQQMTEMS 105
P T +PT+ + L E A +T EK + P P T + +
Sbjct: 466 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 525
Query: 106 ISREDKITTPKTEV----SEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
E TTPK EP T P +P+ + +E AP PK
Sbjct: 526 TPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPKEPAPTTPK 568
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 36.6 bits (83), Expect = 0.016
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 48 SPMGTASGSNSP-------TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQ 100
+P T S +P T + A + + + A +T++ + P P T +
Sbjct: 289 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 348
Query: 101 MTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
+ +E TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 349 KPAPTTPKEPAPTTPK-EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 395
Score = 32.7 bits (73), Expect = 0.24
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 52 TASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDK 111
T + + T + A E + +T E + P P T + + +E
Sbjct: 433 TTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 492
Query: 112 ITTPKTEVSEPVVTQPSPSV-SQPSTSQSEEKAPELPK 148
TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 493 PTTPK-EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPK 529
Score = 30.0 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 50 MGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISRE 109
M T + + D + T+ +T+EK+ + A T +
Sbjct: 818 MTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTP 877
Query: 110 DKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPK 150
KITT KT P VT ++ +T++ K E KPK
Sbjct: 878 FKITTLKTTTLAPKVTTTKKTI---TTTEIMNKPEETAKPK 915
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
+P T S +P S + + E A + + + P P T + + +
Sbjct: 445 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 504
Query: 108 REDKITTPKTEVSEPVVTQP---SPSVSQPSTSQSEEK----APELPKP 149
++ TTPK EP T P +P+ + T + EK PE P P
Sbjct: 505 KKPAPTTPK----EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 549
Score = 28.9 bits (63), Expect = 3.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPST 136
E A + E + P P T + + +E TTPK EP T P +P+
Sbjct: 554 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPK----EPAP 605
Query: 137 SQSEEKAPELPK 148
+ +E AP PK
Sbjct: 606 TTPKETAPTTPK 617
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVS-QPS 135
E A + E + P P T + T + +E TTPK +P + +P+ + +P+
Sbjct: 594 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK----KPAPKELAPTTTKEPT 649
Query: 136 TSQSEEKAPELPK 148
++ ++ AP PK
Sbjct: 650 STTCDKPAPTTPK 662
Score = 28.1 bits (61), Expect = 5.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 49 PMGTASGSNSPTSDSASVQRADTSLNNC--EGAAGSTSEK-SRNVPVAALPVTQQMTEMS 105
P T +PT+ + L E A +T EK + P P T + +
Sbjct: 507 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 566
Query: 106 ISREDKITTPKTEV----SEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
E TTPK EP T P +P+ + +E AP PK
Sbjct: 567 TPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPKEPAPTTPK 609
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 36.6 bits (83), Expect = 0.016
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 48 SPMGTASGSNSP-------TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQ 100
+P T S +P T + A + + + A +T++ + P P T +
Sbjct: 341 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 400
Query: 101 MTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
+ +E TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 401 KPAPTTPKEPAPTTPK-EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 447
Score = 32.7 bits (73), Expect = 0.24
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 52 TASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDK 111
T + + T + A E + +T E + P P T + + +E
Sbjct: 485 TTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 544
Query: 112 ITTPKTEVSEPVVTQPSPSV-SQPSTSQSEEKAPELPK 148
TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 545 PTTPK-EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPK 581
Score = 30.0 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 50 MGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISRE 109
M T + + D + T+ +T+EK+ + A T +
Sbjct: 870 MTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTP 929
Query: 110 DKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPK 150
KITT KT P VT ++ +T++ K E KPK
Sbjct: 930 FKITTLKTTTLAPKVTTTKKTI---TTTEIMNKPEETAKPK 967
Score = 29.6 bits (65), Expect = 2.0
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 53 ASGSNSPTSDSASVQRADTSLNNCEG--------AAGSTSEKSRNVPVAALPVTQQMTEM 104
+S S+S +S S+++++ +S N+ + +++ P PV +
Sbjct: 125 SSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSG 184
Query: 105 SISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELP 147
+ + K+TTP T ++ SP + +T++ P LP
Sbjct: 185 LDNGDFKVTTPDTSTTQHNKVSTSPKI---TTAKPINPRPSLP 224
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
+P T S +P S + + E A + + + P P T + + +
Sbjct: 497 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 556
Query: 108 REDKITTPKTEVSEPVVTQP---SPSVSQPSTSQSEEK----APELPKP 149
++ TTPK EP T P +P+ + T + EK PE P P
Sbjct: 557 KKPAPTTPK----EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 601
Score = 28.9 bits (63), Expect = 3.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPST 136
E A + E + P P T + + +E TTPK EP T P +P+
Sbjct: 606 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPK----EPAP 657
Query: 137 SQSEEKAPELPK 148
+ +E AP PK
Sbjct: 658 TTPKETAPTTPK 669
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVS-QPS 135
E A + E + P P T + T + +E TTPK +P + +P+ + +P+
Sbjct: 646 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK----KPAPKELAPTTTKEPT 701
Query: 136 TSQSEEKAPELPK 148
++ ++ AP PK
Sbjct: 702 STTCDKPAPTTPK 714
Score = 28.1 bits (61), Expect = 5.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 49 PMGTASGSNSPTSDSASVQRADTSLNNC--EGAAGSTSEK-SRNVPVAALPVTQQMTEMS 105
P T +PT+ + L E A +T EK + P P T + +
Sbjct: 559 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 618
Query: 106 ISREDKITTPKTEV----SEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
E TTPK EP T P +P+ + +E AP PK
Sbjct: 619 TPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPKEPAPTTPK 661
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 36.6 bits (83), Expect = 0.016
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 48 SPMGTASGSNSP-------TSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQ 100
+P T S +P T + A + + + A +T++ + P P T +
Sbjct: 382 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 441
Query: 101 MTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
+ +E TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 442 KPAPTTPKEPAPTTPK-EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPK 488
Score = 32.7 bits (73), Expect = 0.24
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 52 TASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDK 111
T + + T + A E + +T E + P P T + + +E
Sbjct: 526 TTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 585
Query: 112 ITTPKTEVSEPVVTQPSPSV-SQPSTSQSEEKAPELPK 148
TTPK E + +P+P+ +P+ + +E AP PK
Sbjct: 586 PTTPK-EPAPTTTKKPAPTTPKEPAPTTPKETAPTTPK 622
Score = 30.0 bits (66), Expect = 1.5
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 50 MGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISRE 109
M T + + D + T+ +T+EK+ + A T +
Sbjct: 911 MTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTP 970
Query: 110 DKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPK 150
KITT KT P VT ++ +T++ K E KPK
Sbjct: 971 FKITTLKTTTLAPKVTTTKKTI---TTTEIMNKPEETAKPK 1008
Score = 29.6 bits (65), Expect = 2.0
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 53 ASGSNSPTSDSASVQRADTSLNNCEG--------AAGSTSEKSRNVPVAALPVTQQMTEM 104
+S S+S +S S+++++ +S N+ + +++ P PV +
Sbjct: 166 SSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSG 225
Query: 105 SISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELP 147
+ + K+TTP T ++ SP + +T++ P LP
Sbjct: 226 LDNGDFKVTTPDTSTTQHNKVSTSPKI---TTAKPINPRPSLP 265
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
+P T S +P S + + E A + + + P P T + + +
Sbjct: 538 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTT 597
Query: 108 REDKITTPKTEVSEPVVTQP---SPSVSQPSTSQSEEK----APELPKP 149
++ TTPK EP T P +P+ + T + EK PE P P
Sbjct: 598 KKPAPTTPK----EPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 642
Score = 28.9 bits (63), Expect = 3.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPST 136
E A + E + P P T + + +E TTPK EP T P +P+
Sbjct: 647 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPK----EPAP 698
Query: 137 SQSEEKAPELPK 148
+ +E AP PK
Sbjct: 699 TTPKETAPTTPK 710
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVS-QPS 135
E A + E + P P T + T + +E TTPK +P + +P+ + +P+
Sbjct: 687 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPK----KPAPKELAPTTTKEPT 742
Query: 136 TSQSEEKAPELPK 148
++ ++ AP PK
Sbjct: 743 STTCDKPAPTTPK 755
Score = 28.1 bits (61), Expect = 5.8
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 11/107 (10%)
Query: 49 PMGTASGSNSPTSDSASVQRADTSLNNC--EGAAGSTSEK-SRNVPVAALPVTQQMTEMS 105
P T +PT+ + L E A +T EK + P P T + +
Sbjct: 600 PAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPT 659
Query: 106 ISREDKITTPKTEV----SEPVVTQPSPSVSQPSTSQSEEKAPELPK 148
E TTPK EP T P +P+ + +E AP PK
Sbjct: 660 TPEEPAPTTPKAAAPNTPKEPAPTTPK----EPAPTTPKEPAPTTPK 702
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 35.8 bits (81), Expect = 0.028
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 43 NSGRMSPMGTASGSNSPTSDSA-------SVQRADTSLNNCEGAAGSTSEKSRNVPV--- 92
++G S TA GS+ PTS ++ + T L N E + ST+ + PV
Sbjct: 2667 STGTSSSPTTAEGSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTS 2726
Query: 93 ---AALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAP 144
++ P T + T M IS +TP T + + S S ST+ + P
Sbjct: 2727 AEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDTSIP 2781
Score = 34.7 bits (78), Expect = 0.062
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 45 GRMSPMGTAS-GSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV------AALPV 97
G + P+ TAS GS TS S T + + E + ST+ ++PV ++ P
Sbjct: 2856 GIVVPISTASEGSTLLTSIPVST----TPVASSEASTLSTTPVDTSIPVTTSTEGSSSPT 2911
Query: 98 TQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAP 144
T + T M IS +++TP T + V S ST+ + + P
Sbjct: 2912 TAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTP 2958
Score = 32.7 bits (73), Expect = 0.24
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 48 SPMGTASGSNSPTSDSAS-------VQRADTSLNNCEGAAGSTSEKSRNVPVAAL----- 95
SP TA G++ PTS S+ + + T + + E + ST+ + PV
Sbjct: 2318 SPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTTPADTSTPVTTYSQAGS 2377
Query: 96 -PVTQQMTEMSISREDKITTPKTEVSEPVVTQP--SPSVSQPSTSQSEEKAP 144
P T T M S + +TP T V PV T P S S ST+ + P
Sbjct: 2378 SPTTADDTSMPTSTYSEGSTPLTSV--PVSTMPVVSSEASTHSTTPVDTSTP 2427
Score = 30.4 bits (67), Expect = 1.2
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 14/113 (12%)
Query: 45 GRMSPMGTASGSNSPTSDSASVQRADTSL-------NNCEGAAGSTSEKSRNVPV----- 92
G SP TA G++ P S + V TS+ E + ST+ PV
Sbjct: 2906 GSSSPT-TAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPVTTSAE 2964
Query: 93 -AALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAP 144
++ P T + T M IS + TP T +S + S S S + ++ P
Sbjct: 2965 ASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTP 3017
Score = 29.3 bits (64), Expect = 2.6
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 46 RMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMS 105
R +P+ + S S P + S + + T + ST S P T + T +
Sbjct: 2985 RRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSS-------PTTAEGTGIP 3037
Query: 106 ISREDKITTPKTEVSEPVVTQP--SPSVSQPSTSQSEEKAP 144
IS + +TP T + PV T P P S ST+ + +P
Sbjct: 3038 ISTPSEGSTPLTSI--PVSTTPVAIPEASTLSTTPVDSNSP 3076
Score = 28.9 bits (63), Expect = 3.4
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSIS 107
+P+ + + +P + SA + T ++N ST +S P T + T M S
Sbjct: 1690 TPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSS-------PTTSEGTSMPNS 1742
Query: 108 REDKITTPKTEVSEPVVTQPSPSVSQPST 136
+ TTP T + PV T P S S+ ST
Sbjct: 1743 TPSEGTTPLTSI--PVSTTPVLS-SEAST 1768
Score = 28.9 bits (63), Expect = 3.4
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 15/109 (13%)
Query: 56 SNSPTSDSASVQ---RADTSLNNCEGAAGSTSEKSR-NVPVAALPVTQQMTEMSISREDK 111
S +P S V A +S EG + TS S + P+ +PV+ T + +S ED
Sbjct: 3126 STTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLTYMPVS---TMLVVSSEDS 3182
Query: 112 I--------TTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKN 152
+TP T +E + + S P+++ SE P P N
Sbjct: 3183 TLSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSN 3231
Score = 28.1 bits (61), Expect = 5.8
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 52 TASGSNSPTSDSA-------SVQRADTSLNNCEGAAGSTSEKSRNVPV------AALPVT 98
TA G++ PTS + S+ + T L + E + ST+ + + + P T
Sbjct: 731 TADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTT 790
Query: 99 QQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAP 144
+ T M IS + + T + + SP S ST+ + +P
Sbjct: 791 TEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSP 836
Score = 28.1 bits (61), Expect = 5.8
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 45 GRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVA------ALPVT 98
G P T S ++P S + + T + + E + ST+ + PV + P T
Sbjct: 3445 GTSLPTSTTSEGSTPLS---IMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTT 3501
Query: 99 QQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPST 136
++T M S + +TP T + PV T P S S+ ST
Sbjct: 3502 AEVTSMPTSTAGEGSTPLTNM--PVSTTPVAS-SEAST 3536
Score = 27.3 bits (59), Expect = 9.9
Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 25/154 (16%)
Query: 48 SPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAA------LPVTQQM 101
+P T+ G + S ++ TS + +SE SR + + P
Sbjct: 4013 TPRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSS 4072
Query: 102 TEMSISREDKITTPKTEVSEPVVTQPS------PSVSQ---PSTSQSEEKAPELPK-PKK 151
T + S P+ + T+PS P+V+ P+ + + P P+
Sbjct: 4073 TPPTTSASSTTVNPEAVTTMTTRTKPSTRTTSFPTVTTTAVPTNTTIKSNPTSTPTVPRT 4132
Query: 152 NRCF---------MCRKKVGLTGFDCRCGNLFCG 176
CF C+ G C+C NL+ G
Sbjct: 4133 TTCFGDGCQNTASRCKNGGTWDGLKCQCPNLYYG 4166
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 35.8 bits (81), Expect = 0.028
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 47 MSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSI 106
+S G +GS S S+ VQ D S++ + G + + VP+ LP T+ + +
Sbjct: 524 VSQQGQGAGSAPSGSGSSWVQGDDPSMSLTQKGDGESQPQFPAVPLEPLPTTEGTPGLPL 583
Query: 107 SREDKITTPKTEVSEPVVTQPSP----------SVSQPSTSQSEEKAPELP 147
+ ++ + E EP+ Q SP + +P Q + AP+ P
Sbjct: 584 QQAEE----RYESQEPLAGQESPLPLATREAALPILEPVLGQEQPAAPDQP 630
>gi|113205075 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 4 isoform a [Homo sapiens]
Length = 408
Score = 35.8 bits (81), Expect = 0.028
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 35 KEH----LQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNV 90
KEH +QR+Q R+ P+ + S S S+S+ R + ++ E A + +K R
Sbjct: 73 KEHPEAPVQRRQKKTRL-PLELETSSTQKKSSSSSLLRNENGID-AEPAEEAVIQKPRRK 130
Query: 91 PVAALPVT-QQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKA 143
P Q E+ + ED IT +T V + V +SQP EK+
Sbjct: 131 TKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKS 184
>gi|113205077 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 4 isoform b [Homo sapiens]
Length = 400
Score = 35.8 bits (81), Expect = 0.028
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 35 KEH----LQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNV 90
KEH +QR+Q R+ P+ + S S S+S+ R + ++ E A + +K R
Sbjct: 65 KEHPEAPVQRRQKKTRL-PLELETSSTQKKSSSSSLLRNENGID-AEPAEEAVIQKPRRK 122
Query: 91 PVAALPVT-QQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKA 143
P Q E+ + ED IT +T V + V +SQP EK+
Sbjct: 123 TKKTQPAELQYANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKS 176
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 35.4 bits (80), Expect = 0.036
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 9 PGPML--CST-GCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSP 49
PGP+ C C FYG T CS CY+E L+R++ + P
Sbjct: 883 PGPVQRRCQRENCAFYGRAETEHYCSYCYREELRRRREARGARP 926
>gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
Length = 790
Score = 35.0 bits (79), Expect = 0.047
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 17 GCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNC 76
GC ++G P G C++C+ E+ + + ASG SPT ++ Q L
Sbjct: 611 GCVYFGTPENKGFCTLCFIEYRENKH-------FAAASGKVSPT--ASRFQNTIPCLGRE 661
Query: 77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPS- 135
G GST + Q+ E + E ++ + +V + P ++ S
Sbjct: 662 CGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTEEQLRSSQRRDVPRTTQSTSRPKCARASC 721
Query: 136 ----TSQSEEKAPELPKPKK 151
+SEE E P +
Sbjct: 722 KNILACRSEELCMECQHPNQ 741
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 35.0 bits (79), Expect = 0.047
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 51 GTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISRED 110
G A+ S+S +S S+S D+ T K + V A + T S S ED
Sbjct: 212 GKAASSSSSSSSSSSSD--DSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSED 269
Query: 111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKN 152
+ + E +P+ +P P S P P P PKK+
Sbjct: 270 SSSDEEEEQKKPMKNKPGPYSSVP--------PPSAPPPKKS 303
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 35.0 bits (79), Expect = 0.047
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 44 SGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTE 103
SG S G + P + A + TS + + S ++KS + ++
Sbjct: 292 SGNSSQPSLREGHDKPVFNGAGKPHSSTSSPSVPKTSASRTQKS----AVEHKAKKSLSH 347
Query: 104 MSISREDKITTPKTEVSEPVVTQPSPSVS----QPSTSQSEEKAPELPKPKK 151
S SR + TP + P V QP S S QPST + P P++
Sbjct: 348 PSHSRPGPMVTPHNKAKSPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRR 399
Score = 28.9 bits (63), Expect = 3.4
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 39 QRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVT 98
+RQ S P + SGS PT+DS +R T C ++S P++ +
Sbjct: 398 RRQNGSSSSGPERSISGSKKPTNDSNPSRR--TVSGTCGPGQPASSSGGPGRPISGSVSS 455
Query: 99 QQMTEMSISREDKITTPKTEVSEPV--VTQPSPSVSQPSTSQS 139
+ S +++P E+ PV + P SVS P S S
Sbjct: 456 ARPLGSSRGPGRPVSSPH-ELRRPVSGLGPPGRSVSGPGRSIS 497
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 34.7 bits (78), Expect = 0.062
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 39 QRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLN-----NCEGAAGSTSEKSRNVPVA 93
Q+ S R P S S P + + +++ + + ++ + S+ V
Sbjct: 1242 QKPTPSAREDPAPKKSSSEPPPRKPVEEKSEEGNVSAPGPESKQATTPASRKSSKQVSQP 1301
Query: 94 ALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNR 153
AL + Q R++ PKT SEP QP P S P S+ ++ AP P K +
Sbjct: 1302 ALVIPPQPPTTGPPRKE---VPKTTPSEPKKKQPPPPESGPEQSKQKKVAPRPSIPVKQK 1358
Score = 33.1 bits (74), Expect = 0.18
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 35 KEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA-DTSLNNCEGAAGSTS-EKSRNVPV 92
K +LQ+Q + + + + + +S+ V+ D+S A + +KS + P
Sbjct: 1203 KAYLQKQAKAVKKKEKKSKTSEKKDSKESSVVKNVVDSSQKPTPSAREDPAPKKSSSEPP 1262
Query: 93 AALPVTQQMTEMSIS----REDKITTPKTEVSEPVVTQPS------------PSVSQPST 136
PV ++ E ++S + TTP + S V+QP+ P P T
Sbjct: 1263 PRKPVEEKSEEGNVSAPGPESKQATTPASRKSSKQVSQPALVIPPQPPTTGPPRKEVPKT 1322
Query: 137 SQSEEKAPELPKPKKNRCFMCRKKV 161
+ SE K + P P+ +KKV
Sbjct: 1323 TPSEPKKKQPPPPESGPEQSKQKKV 1347
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 34.7 bits (78), Expect = 0.062
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 36 EHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAAL 95
+ L Q + SP G+ S S S +SDS S + +S ++ ++ S +R+V AA+
Sbjct: 256 QRLASQASRPTRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAV 315
Query: 96 PVTQQMTEMSISRED 110
P S+ +++
Sbjct: 316 PAPTSQLLSSLEKDE 330
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 34.3 bits (77), Expect = 0.081
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 63 SASVQRADTSLNNCEGAAGSTSEKSRNVPV----AALPVTQQMTEMSISREDKITTPKTE 118
S+SV+ A E A G+ E R+ P L ++ + I D+ P E
Sbjct: 2066 SSSVKTAHFPAEGVEPALGNEKEAHRSTPPFPEEKPLEESKMVQSKVIDDADEGKKPSPE 2125
Query: 119 VSEPVVTQP-------------SPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTG 165
V P +P SP V+Q +Q + P+LP+ K K G++
Sbjct: 2126 VKIPTQRKPISSIHAREPQSPESPEVTQNPPTQPKVAKPDLPEEK--------GKKGISS 2177
Query: 166 FDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAE 208
F +LF G +K D + + + + K V+ E
Sbjct: 2178 FKSWMSSLFFGSSTPDNKVAEQEDLETQPSPSVEKAVTVIDPE 2220
>gi|197245440 hypothetical protein LOC23285 [Homo sapiens]
Length = 1354
Score = 34.3 bits (77), Expect = 0.081
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 70 DTSLNNCEGAAGSTS----EKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVT 125
D SL N E G+ + +K VPV L + ++++ S EDK T ++VS +
Sbjct: 706 DVSLCNPERTNGTLNSAQEDKKSKVPVEGLTIPSKLSDESAMDEDKHATADSDVSSKCFS 765
Query: 126 -----QPSPSVSQPSTSQSEEKAPELP 147
+ SP + S S + PE P
Sbjct: 766 GQLSEKNSPKNMETSESPESHETPETP 792
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 34.3 bits (77), Expect = 0.081
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 112 ITTPKTEVSEPVVTQ--PSPSVSQPSTSQSEEKAPELPKP----KKNRCFMCRKKVGLTG 165
+ TPKTE E V+Q +P+ + S+S EE+ P P+P K+ R + K GL G
Sbjct: 898 LLTPKTEPEELAVSQGGAAPATEESSSSSEEEEVPSSPEPPRPAKRPRRELGSK--GLKG 955
Query: 166 FDCRCGNLFCGL 177
G CGL
Sbjct: 956 GGGGPGGWTCGL 967
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.125 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,494,947
Number of Sequences: 37866
Number of extensions: 467523
Number of successful extensions: 2711
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 2328
Number of HSP's gapped (non-prelim): 487
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.