SPEN 4322

Name: SPEN	Sequence: fasta or formatted (3664aa)		NCBI GI: 14790190
Description: spen homolog, transcriptional regulator		Referenced in: RNA-binding Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 297 3 C cysteine 0.5 18 1 D aspartate 5.3 195 2 E glutamate 8.8 324 4 F phenylalanine 1.8 65 2 G glycine 4.9 180 5 H histidine 2.2 81 2 I isoleucine 3.1 113 2 K lysine 7.1 260 4 L leucine 6.2 228 3 M methionine 1.2 45 2 N asparagine 2.8 103 2 P proline 10.0 368 4 Q glutamine 4.9 180 2 R arginine 7.0 257 3 S serine 10.8 395 6 T threonine 5.8 213 3 V valine 7.0 257 3 W tryptophan 0.3 11 1 Y tyrosine 2.0 74 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spen homolog, transcriptional regulator MUC17 0.016 mucin 17 NACA 0.015 nascent polypeptide-associated complex alpha subuni... MUC2 0.015 mucin 2 precursor NEFH 0.014 neurofilament, heavy polypeptide 200kDa RBM15 0.013 RNA binding motif protein 15 RBM15B 0.012 RNA binding motif protein 15B FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 TTN 0.012 titin isoform N2-A LOC100294236 0.011 PREDICTED: similar to diffuse panbronchiolitis crit... PRG4 0.011 proteoglycan 4 isoform B PRG4 0.011 proteoglycan 4 isoform A SRRM2 0.011 splicing coactivator subunit SRm300 TCHH 0.011 trichohyalin GLTSCR1 0.011 glioma tumor suppressor candidate region gene 1 [Ho... RP1L1 0.010 retinitis pigmentosa 1-like 1 SRCAP 0.010 Snf2-related CBP activator protein MUC4 0.010 mucin 4 isoform a MDC1 0.010 mediator of DNA-damage checkpoint 1 MUC12 0.010 PREDICTED: mucin 12 PRG4 0.010 proteoglycan 4 isoform D PRG4 0.010 proteoglycan 4 isoform C NOLC1 0.010 nucleolar and coiled-body phosphoprotein 1 MAP1B 0.009 microtubule-associated protein 1B TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform a ... AKAP12 0.009 A kinase (PRKA) anchor protein 12 isoform 1 LOC647546 0.009 PREDICTED: hypothetical protein MUC12 0.009 PREDICTED: mucin 12, cell surface associated AKAP12 0.009 A kinase (PRKA) anchor protein 12 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.