Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFAND5 Sequence: fasta or formatted (213aa) NCBI GI: 156231049
Description:

zinc finger, AN1-type domain 5

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt mRNA [213aa] zinc finger, AN1-type domain 5
alt mRNA [213aa] zinc finger, AN1-type domain 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         14           3
 C cysteine            5.2         11           1
 D aspartate           2.8          6           1
 E glutamate           6.6         14           2
 F phenylalanine       1.9          4           1
 G glycine             6.6         14           1
 H histidine           1.4          3           1
 I isoleucine          2.3          5           1
 K lysine              7.0         15           2
 L leucine             3.8          8           1
 M methionine          3.8          8           1
 N asparagine          5.6         12           2
 P proline             8.0         17           1
 Q glutamine           5.6         12           2
 R arginine            5.6         12           1
 S serine             11.3         24           1
 T threonine           7.5         16           2
 V valine              6.1         13           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 5 
ZFAND5                1.000   zinc finger, AN1-type domain 5 
ZFAND5                1.000   zinc finger, AN1-type domain 5 
ZFAND6                0.500   zinc finger, AN1-type domain 6 
ANUBL1                0.125   AN1, ubiquitin-like, homolog 
ANUBL1                0.125   AN1, ubiquitin-like, homolog 
ZFAND3                0.106   zinc finger, AN1-type domain 3 
RABGEF1               0.048   RAB guanine nucleotide exchange factor (GEF) 1 
OTUD7B                0.038   zinc finger protein Cezanne 
MDC1                  0.031   mediator of DNA-damage checkpoint 1 
CAMSAP1               0.029   calmodulin regulated spectrin-associated protein 1 ...
NACA                  0.029   nascent polypeptide-associated complex alpha subuni...
C19orf44              0.029   hypothetical protein LOC84167 
PRG4                  0.029   proteoglycan 4 isoform D 
PRG4                  0.029   proteoglycan 4 isoform C 
PRG4                  0.029   proteoglycan 4 isoform B 
PRG4                  0.029   proteoglycan 4 isoform A 
MUC17                 0.026   mucin 17 
TNKS1BP1              0.026   tankyrase 1-binding protein 1 
ALS2CR4               0.026   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
ALS2CR4               0.026   amyotrophic lateral sclerosis 2 (juvenile) chromoso...
OTUD7A                0.024   OTU domain containing 7A 
TNFAIP3               0.024   tumor necrosis factor, alpha-induced protein 3 
NOLC1                 0.024   nucleolar and coiled-body phosphoprotein 1 
SPTY2D1               0.024   SPT2, Suppressor of Ty, domain containing 1 
MLL                   0.024   myeloid/lymphoid or mixed-lineage leukemia protein [...
SPEN                  0.024   spen homolog, transcriptional regulator 
CMYA5                 0.022   cardiomyopathy associated 5 
KIAA1107              0.022   hypothetical protein LOC23285 
ZNF687                0.022   zinc finger protein 687 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press