Guide to the Human Genome
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Name: ZFAND3 Sequence: fasta or formatted (227aa) NCBI GI: 11345484
Description:

zinc finger, AN1-type domain 3

Referenced in:

Testes and Sperm
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          7           1
 C cysteine            6.6         15           1
 D aspartate           5.3         12           3
 E glutamate           7.9         18           2
 F phenylalanine       3.1          7           1
 G glycine             5.7         13           1
 H histidine           1.8          4           1
 I isoleucine          1.8          4           1
 K lysine              6.2         14           2
 L leucine             6.6         15           2
 M methionine          2.6          6           1
 N asparagine          3.5          8           3
 P proline             7.0         16           2
 Q glutamine           5.7         13           2
 R arginine            7.5         17           3
 S serine             13.2         30           2
 T threonine           8.4         19           2
 V valine              3.1          7           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 3 
ZFAND6                0.104   zinc finger, AN1-type domain 6 
ZFAND5                0.098   zinc finger, AN1-type domain 5 
ZFAND5                0.098   zinc finger, AN1-type domain 5 
ZFAND5                0.098   zinc finger, AN1-type domain 5 
ANUBL1                0.053   AN1, ubiquitin-like, homolog 
ANUBL1                0.053   AN1, ubiquitin-like, homolog 
TRIP12                0.031   thyroid hormone receptor interactor 12 
ZAN                   0.029   zonadhesin isoform 3 
ZAN                   0.029   zonadhesin isoform 6 
GPR112                0.022   G-protein coupled receptor 112 
MSL3                  0.020   male-specific lethal 3-like 1 isoform d 
RIF1                  0.020   RAP1 interacting factor 1 
CHAF1B                0.018   chromatin assembly factor 1 subunit B 
LOC100131897          0.018   hypothetical protein LOC100131897 
KIF21A                0.018   kinesin family member 21A 
ZFYVE21               0.018   zinc finger, FYVE domain containing 21 
AFF4                  0.018   ALL1 fused gene from 5q31 
DSPP                  0.018   dentin sialophosphoprotein preproprotein 
MAP7                  0.018   microtubule-associated protein 7 
ZFAND1                0.018   zinc finger, AN1-type domain 1 
LOC100131251          0.016   PREDICTED: hypothetical protein 
LOC100131251          0.016   PREDICTED: hypothetical protein 
ZRANB2                0.016   zinc finger protein 265 isoform 1 
DNTTIP2               0.016   deoxynucleotidyltransferase, terminal, interacting p...
PCF11                 0.016   pre-mRNA cleavage complex II protein Pcf11 
ZNF280D               0.016   suppressor of hairy wing homolog 4 isoform 2 
ZNF280D               0.016   suppressor of hairy wing homolog 4 isoform 1 
DPCR1                 0.013   diffuse panbronchiolitis critical region 1 protein ...
UBE2E1                0.013   ubiquitin-conjugating enzyme E2E 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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