Guide to the Human Genome
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Name: KIAA1107 Sequence: fasta or formatted (1354aa) NCBI GI: 197245440
Description:

hypothetical protein LOC23285

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         66           5
 C cysteine            2.1         28           2
 D aspartate           7.5        102           3
 E glutamate           7.5        102           3
 F phenylalanine       2.2         30           1
 G glycine             4.4         60           2
 H histidine           2.3         31           2
 I isoleucine          4.1         56           2
 K lysine              9.4        127           2
 L leucine             6.9         94           3
 M methionine          1.6         22           2
 N asparagine          6.4         86           3
 P proline             4.3         58           2
 Q glutamine           5.3         72           2
 R arginine            4.0         54           2
 S serine             14.0        189           3
 T threonine           6.6         90           3
 V valine              5.0         68           2
 W tryptophan          0.7          9           1
 Y tyrosine            0.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23285 
DSPP                  0.021   dentin sialophosphoprotein preproprotein 
AFF4                  0.013   ALL1 fused gene from 5q31 
LOC400986             0.012   PREDICTED: protein immuno-reactive with anti-PTH po...
ATRX                  0.011   transcriptional regulator ATRX isoform 2 
ATRX                  0.011   transcriptional regulator ATRX isoform 1 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.011   PREDICTED: hypothetical protein LOC80164 
NOLC1                 0.010   nucleolar and coiled-body phosphoprotein 1 
RIF1                  0.010   RAP1 interacting factor 1 
BOD1L                 0.009   biorientation of chromosomes in cell division 1-like...
ANKRD36               0.009   PREDICTED: ankyrin repeat domain 36 
ANKRD36               0.009   PREDICTED: ankyrin repeat domain 36 
SFRS18                0.008   splicing factor, arginine/serine-rich 130 
SFRS18                0.008   splicing factor, arginine/serine-rich 130 
IWS1                  0.008   IWS1 homolog 
MAP1B                 0.008   microtubule-associated protein 1B 
MED1                  0.008   mediator complex subunit 1 
MUC21                 0.008   mucin 21 
ANKRD12               0.008   ankyrin repeat domain 12 isoform 2 
MLL                   0.007   myeloid/lymphoid or mixed-lineage leukemia protein [...
MLLT1                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
DPCR1                 0.007   diffuse panbronchiolitis critical region 1 protein ...
MLLT3                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithor...
PRPF4B                0.007   serine/threonine-protein kinase PRP4K 
ANKRD12               0.006   ankyrin repeat domain 12 isoform 1 
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 1 
LOC100294236          0.006   PREDICTED: similar to diffuse panbronchiolitis crit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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