Name: TNFAIP3 | Sequence: fasta or formatted (790aa) | NCBI GI: 5454132 | |
Description: tumor necrosis factor, alpha-induced protein 3
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Referenced in: TNF and Related Signals
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.3 50 3 C cysteine 5.1 40 1 D aspartate 3.8 30 2 E glutamate 7.2 57 2 F phenylalanine 4.3 34 2 G glycine 5.7 45 2 H histidine 3.8 30 2 I isoleucine 3.4 27 2 K lysine 5.8 46 2 L leucine 8.1 64 2 M methionine 2.5 20 1 N asparagine 5.1 40 1 P proline 7.1 56 2 Q glutamine 4.9 39 1 R arginine 7.1 56 2 S serine 6.7 53 3 T threonine 5.9 47 2 V valine 3.7 29 1 W tryptophan 1.1 9 1 Y tyrosine 2.3 18 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 tumor necrosis factor, alpha-induced protein 3 OTUD7B 0.097 zinc finger protein Cezanne OTUD7A 0.089 OTU domain containing 7A ZRANB1 0.063 zinc finger, RAN-binding domain containing 1 protei... VCPIP1 0.020 valosin containing protein (p97)/p47 complex interac... ZFAND6 0.009 zinc finger, AN1-type domain 6 NOTCH3 0.006 Notch homolog 3 LOC100293212 0.006 PREDICTED: hypothetical protein LOC100289796 0.006 PREDICTED: hypothetical protein XP_002346485 LOC100288812 0.006 PREDICTED: hypothetical protein XP_002342329 ZFAND5 0.006 zinc finger, AN1-type domain 5 ZFAND5 0.006 zinc finger, AN1-type domain 5 ZFAND5 0.006 zinc finger, AN1-type domain 5 LOC100292407 0.005 PREDICTED: hypothetical protein ZNF581 0.005 zinc finger protein 581 CASZ1 0.005 castor homolog 1, zinc finger isoform a EGR2 0.005 early growth response 2 protein isoform b EGR2 0.005 early growth response 2 protein isoform a EGR2 0.005 early growth response 2 protein isoform a EGR2 0.005 early growth response 2 protein isoform a LOC100292227 0.005 PREDICTED: hypothetical protein LOC100289692 0.005 PREDICTED: hypothetical protein XP_002347699 LOC100287811 0.005 PREDICTED: hypothetical protein XP_002344136 LAMA2 0.005 laminin alpha 2 subunit isoform b precursor LAMA2 0.005 laminin alpha 2 subunit isoform a precursor MCTP1 0.005 multiple C2 domains, transmembrane 1 isoform L [Hom... FAM53A 0.005 dorsal neural-tube nuclear protein MID2 0.004 midline 2 isoform 2 MID2 0.004 midline 2 isoform 1 LOC100131696 0.004 PREDICTED: keratin associated proteinHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.