Guide to the Human Genome
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Name: ZFAND6 Sequence: fasta or formatted (208aa) NCBI GI: 21359918
Description:

zinc finger, AN1-type domain 6

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         11           2
 C cysteine            5.3         11           1
 D aspartate           3.8          8           1
 E glutamate           6.7         14           2
 F phenylalanine       1.4          3           1
 G glycine             5.3         11           1
 H histidine           1.9          4           1
 I isoleucine          1.9          4           1
 K lysine              6.7         14           2
 L leucine             4.8         10           2
 M methionine          2.4          5           1
 N asparagine          5.3         11           1
 P proline             5.8         12           2
 Q glutamine           7.2         15           2
 R arginine            3.8          8           1
 S serine             15.9         33           3
 T threonine           4.8         10           1
 V valine              8.7         18           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 6 
ZFAND5                0.521   zinc finger, AN1-type domain 5 
ZFAND5                0.521   zinc finger, AN1-type domain 5 
ZFAND5                0.521   zinc finger, AN1-type domain 5 
ANUBL1                0.130   AN1, ubiquitin-like, homolog 
ANUBL1                0.130   AN1, ubiquitin-like, homolog 
ZFAND3                0.118   zinc finger, AN1-type domain 3 
RABGEF1               0.045   RAB guanine nucleotide exchange factor (GEF) 1 
OTUD7B                0.038   zinc finger protein Cezanne 
IGHMBP2               0.038   immunoglobulin mu binding protein 2 
TNFAIP3               0.035   tumor necrosis factor, alpha-induced protein 3 
TNRC18                0.033   trinucleotide repeat containing 18 
BRDT                  0.030   testis-specific bromodomain protein 
BRDT                  0.030   testis-specific bromodomain protein 
ZNF335                0.030   zinc finger protein 335 
OTUD7A                0.028   OTU domain containing 7A 
BMPR2                 0.028   bone morphogenetic protein receptor type II precurso...
SRRM2                 0.028   splicing coactivator subunit SRm300 
ZCCHC10               0.028   zinc finger, CCHC domain containing 10 
MARCKS                0.025   myristoylated alanine-rich protein kinase C substra...
PHC3                  0.025   polyhomeotic like 3 
ZNF750                0.025   zinc finger protein 750 
C10orf140             0.023   hypothetical protein LOC387640 
SPATS2                0.020   spermatogenesis associated, serine-rich 2 
MUC16                 0.020   mucin 16 
DSPP                  0.020   dentin sialophosphoprotein preproprotein 
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.020   retinoblastoma protein-binding zinc finger protein i...
PNN                   0.020   pinin, desmosome associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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