Search of human proteins with 156119605

Search of human proteins with 156119605

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156119605 general transcription factor IIIC 4 [Homo sapiens]
         (822 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156119605 general transcription factor IIIC 4 [Homo sapiens]      1679   0.0  
gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo sa...    36   0.17 
gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo sa...    36   0.17 
gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]         34   0.63 
gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]         34   0.63 
gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]         34   0.63 
gi|30578412 potassium channel tetramerisation domain containing ...    34   0.63 
gi|23957698 luman-recruiting factor [Homo sapiens]                     33   1.4  
gi|10863945 ATP-dependent DNA helicase II [Homo sapiens]               32   1.8  
gi|62241003 cardiomyopathy associated 5 [Homo sapiens]                 32   1.8  
gi|46560555 transmembrane protein 132E [Homo sapiens]                  32   1.8  
gi|30039694 zinc finger protein 598 [Homo sapiens]                     32   1.8  
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]            32   2.4  
gi|46255045 holocarboxylase synthetase [Homo sapiens]                  32   2.4  
gi|13540521 basic helix-loop-helix domain containing, class B, 3...    32   2.4  
gi|221219020 NYD-SP11 protein [Homo sapiens]                           32   3.1  
gi|170763500 SET translocation (myeloid leukemia-associated) iso...    32   3.1  
gi|170763498 SET translocation (myeloid leukemia-associated) iso...    32   3.1  
gi|207452735 epiplakin 1 [Homo sapiens]                                32   3.1  
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]        32   3.1  
gi|147902746 MEX3A protein [Homo sapiens]                              31   4.1  
gi|239757016 PREDICTED: similar to RNA polymerase II transcripti...    31   5.3  
gi|15029530 leucine rich repeat containing 4 [Homo sapiens]            31   5.3  
gi|154816198 transcription elongation factor B polypeptide 3C-li...    31   5.3  
gi|156938279 transcription elongation factor B polypeptide 3C [H...    31   5.3  
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro...    30   7.0  
gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]             30   7.0  
gi|190194423 SPARC-like 1 [Homo sapiens]                               30   7.0  
gi|190341024 SPARC-like 1 [Homo sapiens]                               30   7.0  
gi|4758392 forkhead box D1 [Homo sapiens]                              30   7.0  

>gi|156119605 general transcription factor IIIC 4 [Homo sapiens]
          Length = 822

 Score = 1679 bits (4349), Expect = 0.0
 Identities = 822/822 (100%), Positives = 822/822 (100%)

Query: 1   MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60
           MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL
Sbjct: 1   MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60

Query: 61  QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV 120
           QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV
Sbjct: 61  QYAVSGLEPLAWSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKV 120

Query: 121 GSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC 180
           GSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC
Sbjct: 121 GSKTEVAECKEKFAASKDPTVSQTFMLDRVFNPEGKALPPMRGFKYTSWSPMGCDANGRC 180

Query: 181 LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQ 240
           LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQ
Sbjct: 181 LLAALTMDNRLTIQANLNRLQWVQLVDLTEIYGERLYETSYRLSKNEAPEGNLGDFAEFQ 240

Query: 241 RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI 300
           RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI
Sbjct: 241 RRHSMQTPVRMEWSGICTTQQVKHNNECRDVGSVLLAVLFENGNIAVWQFQLPFVGKESI 300

Query: 301 SSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV 360
           SSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV
Sbjct: 301 SSCNTIESGITSPSVLFWWEYEHNNRKMSGLIVGSAFGPIKILPVNLKAVKGYFTLRQPV 360

Query: 361 ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG 420
           ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG
Sbjct: 361 ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWCLLLISKAGLNVHNSHVTG 420

Query: 421 LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGI 480
           LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGI
Sbjct: 421 LHSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSVRTHGI 480

Query: 481 AVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI 540
           AVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI
Sbjct: 481 AVSPCGAYLAIITTEGMINGLHPVNKNYQVQFVTLKTFEEAAAQLLESSVQNLFKQVDLI 540

Query: 541 DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPT 600
           DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPT
Sbjct: 541 DLVRWKILKDKHIPQFLQEALEKKIESSGVTYFWRFKLFLLRILYQSMQKTPSEALWKPT 600

Query: 601 HEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAG 660
           HEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAG
Sbjct: 601 HEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAG 660

Query: 661 GREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE 720
           GREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE
Sbjct: 661 GREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGEVYLHTWITENTSIPTRGLCNFLMSDE 720

Query: 721 EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSC 780
           EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSC
Sbjct: 721 EYDDRTARVLIGHISKKMNKQTFPEHCSLCKEILPFTDRKQAVCSNGHIWLRCFLTYQSC 780

Query: 781 QSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 822
           QSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF
Sbjct: 781 QSLIYRRCLLHDSIARHPAPEDPDWIKRLLQSPCPFCDSPVF 822


>gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
           sapiens]
          Length = 783

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 20/90 (22%), Positives = 43/90 (47%)

Query: 592 PSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDD 651
           P   L  P +ED++  +  S G GN D+EQ  EG + + +     +E+ +E + ++  + 
Sbjct: 426 PPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLEL 485

Query: 652 SLPTTGDAGGREPMEEKLLEIQGKIEAVEM 681
                 +   +E   +K  ++ G I+ + +
Sbjct: 486 EKKEQKEKEKKEQEIKKKFKLTGPIQVIHL 515


>gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo
           sapiens]
          Length = 829

 Score = 35.8 bits (81), Expect = 0.17
 Identities = 20/90 (22%), Positives = 43/90 (47%)

Query: 592 PSEALWKPTHEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDD 651
           P   L  P +ED++  +  S G GN D+EQ  EG + + +     +E+ +E + ++  + 
Sbjct: 426 PPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLEL 485

Query: 652 SLPTTGDAGGREPMEEKLLEIQGKIEAVEM 681
                 +   +E   +K  ++ G I+ + +
Sbjct: 486 EKKEQKEKEKKEQEIKKKFKLTGPIQVIHL 515


>gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]
          Length = 1072

 Score = 33.9 bits (76), Expect = 0.63
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 5   DQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPG 42
           +  R G AD  P P G   G  GG +GG +   DA+ G
Sbjct: 194 ESRRAGAADSAPYPGGGGNGASGGGSGGSKRRLDASEG 231


>gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]
          Length = 1200

 Score = 33.9 bits (76), Expect = 0.63
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 5   DQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPG 42
           +  R G AD  P P G   G  GG +GG +   DA+ G
Sbjct: 194 ESRRAGAADSAPYPGGGGNGASGGGSGGSKRRLDASEG 231


>gi|14589931 protocadherin 7 isoform a precursor [Homo sapiens]
          Length = 1069

 Score = 33.9 bits (76), Expect = 0.63
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 5   DQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPG 42
           +  R G AD  P P G   G  GG +GG +   DA+ G
Sbjct: 194 ESRRAGAADSAPYPGGGGNGASGGGSGGSKRRLDASEG 231


>gi|30578412 potassium channel tetramerisation domain containing 13
           [Homo sapiens]
          Length = 329

 Score = 33.9 bits (76), Expect = 0.63
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 423 SLPIVSMTADKQNGTV-YTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFG 473
           S P+V +  ++ N    YT +SD  + + I +F  +AL+F  +L+ L DV G
Sbjct: 167 SKPVVKLLHNRSNNKYSYTSTSDDNLLKNIELFDKLALRFHGRLLFLKDVLG 218


>gi|23957698 luman-recruiting factor [Homo sapiens]
          Length = 639

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 616 NADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAGGRE 663
           + DDE  +EG  S+  + +  +E  +E D E+  DD +  T    G E
Sbjct: 363 DVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYE 410


>gi|10863945 ATP-dependent DNA helicase II [Homo sapiens]
          Length = 732

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 14/103 (13%)

Query: 486 GAYLAIIT-TEGMINGLHPVN--KNYQVQFVTLK-TFEEAAAQLLESSVQNL-------- 533
           GA+ ++ +  EG +  +  VN  +N++V     K +FEEA+ QL+    Q L        
Sbjct: 573 GAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKASFEEASNQLINHIEQFLDTNETPYF 632

Query: 534 FKQVDLIDLVRWKILKDKHIPQF--LQEALEKKIESSGVTYFW 574
            K +D I   R + +K     +F    +AL++K+E   + +FW
Sbjct: 633 MKSIDCIRAFREEAIKFSEEQRFNNFLKALQEKVEIKQLNHFW 675


>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
          Length = 4069

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 600 THEDSKILLVDSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLP 654
           +HED K +  DSP    +  E      SS    +QG+Q R  +   ++P D++ P
Sbjct: 319 SHEDQKKIYADSPLNATSALEHTVPSYSSSGRAEQGIQLRHSQSVPQQPEDEAKP 373


>gi|46560555 transmembrane protein 132E [Homo sapiens]
          Length = 984

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 10  GPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAA 46
           GP+  GP   GE+E  G G  G   PA +A PGP  A
Sbjct: 736 GPSQPGPG-GGEDEARGAGPPGSALPAPEA-PGPGTA 770


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 740 KQTFPEHCSLCKEILPFT---DRKQAVCSNGHIWLRCFLTYQSCQSLIY-RRCLLHDSIA 795
           +Q     C  C E+ PF+   D +Q +    H    C L  Q  Q   Y R+      +A
Sbjct: 112 RQLLQHECPRCPELPPFSLFGDLEQHM-RRQHELFCCRLCLQHLQIFTYERKWYSRKDLA 170

Query: 796 RHPAPEDPDWIKRLLQSPCPFCD 818
           RH    DPD         C FCD
Sbjct: 171 RHRMQGDPDDTSHRGHPLCKFCD 193


>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 109

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 591 TPSEALWKPTHEDSKILLV-----DSPGMGNADDEQQEEGTSSKQVVKQG-----LQERS 640
           T SE + K   E  +++       D+P  GNA++E  E+  + K+V ++G      +E  
Sbjct: 8   TSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQ-EADKEVDEEGEESGEEEEEE 66

Query: 641 KEGDVEEPTDDSLPTTGDAGGREPMEEK 668
           KEGD EE   D        G R   +++
Sbjct: 67  KEGDGEEEDGDEEEAESATGKRAAEDDE 94


>gi|46255045 holocarboxylase synthetase [Homo sapiens]
          Length = 726

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)

Query: 14  DGPAPSGEEEGEGGGEAGGKEPAADA--APGPSAAFRLMVTRREPAVKLQYAVSGLEPLA 71
           D P   GEE  +  G A G EPA D+    GP   + L ++     ++L+   S +E + 
Sbjct: 64  DDPKALGEEPKQRRGSASGSEPAGDSDRGGGPVEHYHLHLSSCHECLELEN--STIESVK 121

Query: 72  WSEDHRVSVSTARSIAVLELICDVHNPGQDLVIHRTSVPAPLNSCLLKVGSKTEVA 127
           ++    +        + LE + D  +P ++    R ++     + LL VGS ++ A
Sbjct: 122 FASAENIPDLPYDYSSSLESVADETSPERE--GRRVNLTGKAPNILLYVGSDSQEA 175


>gi|13540521 basic helix-loop-helix domain containing, class B, 3
           [Homo sapiens]
          Length = 482

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 11  PADDGPAPS-----GEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAV 58
           P +D PAP          G GGG  GG   AA A  GP  A    + R + A+
Sbjct: 270 PGEDSPAPKRMKLDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAAL 322


>gi|221219020 NYD-SP11 protein [Homo sapiens]
          Length = 2873

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 14/168 (8%)

Query: 539  LIDLVRWKILKDKHIPQFLQEALEKKIESSGVTY-FWRFKLFLLRILYQSMQKTPSEALW 597
            L++ + W ++  +  P F+QE   ++    GVT    R K  + R   Q+ +K       
Sbjct: 1301 LLEDLDWDVVPPEKKPIFIQEGAIREDMIQGVTQEVIRHKEVMPREEEQAQKKARDMLGL 1360

Query: 598  KPTH----EDSKILLVDSPG---MGNADDEQQEEGTSSKQVVKQG---LQERSKEGDVE- 646
            + T     +  K++ ++ PG   MG    +++E+ T  K   KQG   +Q+  K G ++ 
Sbjct: 1361 EETQVILKKGKKVIFLE-PGNVTMGKEISKKEEKKTFQKSP-KQGRKAVQKERKVGKIKR 1418

Query: 647  EPTDDSLPTTGDAGGREPMEEKLLEIQGKIEAVEMHLTREHMKRVLGE 694
            E T +    + +      +EEK+++ +GK+  +E   + +  K+   E
Sbjct: 1419 EMTKEERDMSEEVEEMATLEEKVVKQEGKLVMIERTPSWQDWKKAWDE 1466


>gi|170763500 SET translocation (myeloid leukemia-associated)
           isoform 1 [Homo sapiens]
          Length = 290

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 610 DSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEE 667
           D  G G  DD+  EE        ++GL++  +EGD +E  +D     G+ G  +  E+
Sbjct: 240 DEEGEGEEDDDDDEE--------EEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGED 289


>gi|170763498 SET translocation (myeloid leukemia-associated)
           isoform 2 [Homo sapiens]
          Length = 277

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 610 DSPGMGNADDEQQEEGTSSKQVVKQGLQERSKEGDVEEPTDDSLPTTGDAGGREPMEE 667
           D  G G  DD+  EE        ++GL++  +EGD +E  +D     G+ G  +  E+
Sbjct: 227 DEEGEGEEDDDDDEE--------EEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGED 276


>gi|207452735 epiplakin 1 [Homo sapiens]
          Length = 5090

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 7    ARVGPADDGPA-----PSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQ 61
            AR GP + GPA      SG  + EG GE   +E AA AA    AA R   T R+  +++Q
Sbjct: 2591 ARRGPREPGPAGRGDGDSGRSQREGQGEGETQEAAAAAA----AARRQEQTLRDATMEVQ 2646



 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 10   GPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQ 61
            GPA  G   SG  + EG GE   +E AA AA    AA R   T R+  +++Q
Sbjct: 3133 GPAGRGDGDSGRSQREGQGEGETQEAAAAAA----AARRQEQTLRDATMEVQ 3180



 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 10   GPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQ 61
            GPA  G   SG  + EG GE   +E AA AA    AA R   T R+  +++Q
Sbjct: 3667 GPAGRGDGDSGRSQREGQGEGETQEAAAAAA----AARRQEQTLRDATMEVQ 3714



 Score = 31.2 bits (69), Expect = 4.1
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 10   GPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKLQ 61
            GPA  G   SG  + EG GE   +E AA AA    AA R   T R+  +++Q
Sbjct: 4735 GPAGRGDGDSGRSQREGQGEGETQEAAAAAA----AARRQEQTLRDATMEVQ 4782


>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
          Length = 1215

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2   NTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAA 46
           NT   A  GP DD     G   G GGG      PAA +A   SAA
Sbjct: 128 NTGGGAAGGPGDDSGGGGG--AGGGGGGGSSSSPAATSAAATSAA 170


>gi|147902746 MEX3A protein [Homo sapiens]
          Length = 520

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 16 PAPSGEEEGEGGGEAGGKEPAADAAPGP 43
          PAP+  E+G GGG     +PAA   P P
Sbjct: 54 PAPTAGEDGGGGGGGAPAQPAAPPQPAP 81


>gi|239757016 PREDICTED: similar to RNA polymerase II
          transcription factor SIII subunit A3, partial [Homo
          sapiens]
          Length = 78

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 11 PADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60
          PA    APSG  +G+GG  +GG      AAP          TR++ A K+
Sbjct: 18 PAGSSQAPSGLGDGDGGSGSGGGSSNRHAAPADK-------TRKQAAKKV 60


>gi|15029530 leucine rich repeat containing 4 [Homo sapiens]
          Length = 653

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 361 ILWKEMDQLPVHSIKCVPLYHPYQKCSCSLVVAARGSYVFWC---LLLISKAGLNVHNSH 417
           + W   + +P +S  C   + P       LV   + S  F C    ++ +   LN+    
Sbjct: 311 LAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEVDQAS--FQCSAPFIMDAPRDLNISEGR 368

Query: 418 VTGL--HSLPIVSMTADKQNGTVYTCSSDGKVRQLIPIFTDVALKFEHQLIKLSDVFGSV 475
           +  L   + P+ S+     NGTV + +S       I +  D  L F H L+  + V+  +
Sbjct: 369 MAELKCRTPPMSSVKWLLPNGTVLSHASR---HPRISVLNDGTLNFSHVLLSDTGVYTCM 425

Query: 476 RTHGIAVSPCGAYLAIITTE 495
            T+    S   AYL + T E
Sbjct: 426 VTNVAGNSNASAYLNVSTAE 445


>gi|154816198 transcription elongation factor B polypeptide 3C-like
           [Homo sapiens]
          Length = 546

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 11  PADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60
           PA    APSG  +G+GG  +GG      AAP          TR++ A K+
Sbjct: 486 PAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADK-------TRKQAAKKV 528


>gi|156938279 transcription elongation factor B polypeptide 3C [Homo
           sapiens]
          Length = 546

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 11  PADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFRLMVTRREPAVKL 60
           PA    APSG  +G+GG  +GG      AAP          TR++ A K+
Sbjct: 486 PAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADK-------TRKQAAKKV 528


>gi|19923312 v-myc myelocytomatosis viral related oncogene,
           neuroblastoma derived [Homo sapiens]
          Length = 464

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 3   TADQARVGPADDGPAPSGEEEG--EGGGEAGGKEPAADAAPG-----PSAAFRLMVTRRE 55
           TA      P     +P+G   G   G G AG   PA  A P      P+  F   V +RE
Sbjct: 142 TAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVDPAVVFPFPVNKRE 201

Query: 56  PA 57
           PA
Sbjct: 202 PA 203


>gi|224922812 tropomyosin 2 (beta) isoform 3 [Homo sapiens]
          Length = 231

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 609 VDSPGMGNADDEQQEEGTSSKQVVKQGLQERSK--EGDVEEPTDDSLPTTGDAGGREPME 666
           +D      AD +Q E+     +  +Q LQ++ K  E +VE+ ++          G + +E
Sbjct: 19  IDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKYSESEKAADESERGMKVIE 78

Query: 667 EKLLEIQGKIEAVEMHL 683
            + ++ + K+E  EM L
Sbjct: 79  NRAMKDEEKMELQEMQL 95


>gi|190194423 SPARC-like 1 [Homo sapiens]
          Length = 664

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 1   MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAF 47
           M   D     P + G    G+++G+ GG  G +  A+D    PS AF
Sbjct: 322 MEPTDDGNTTPRNHGVDDDGDDDGDDGGTDGPRHSASDDYFIPSQAF 368


>gi|190341024 SPARC-like 1 [Homo sapiens]
          Length = 664

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 1   MNTADQARVGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAF 47
           M   D     P + G    G+++G+ GG  G +  A+D    PS AF
Sbjct: 322 MEPTDDGNTTPRNHGVDDDGDDDGDDGGTDGPRHSASDDYFIPSQAF 368


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 4   ADQARVGPADDGPAP---SGEEEGEGGGEAGGKEPAADAAPGP 43
           A  A   PA  GPAP   +G   G GGG AGG   A   A  P
Sbjct: 80  APPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGSGAKNP 122


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,978,475
Number of Sequences: 37866
Number of extensions: 1622584
Number of successful extensions: 6635
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6560
Number of HSP's gapped (non-prelim): 90
length of query: 822
length of database: 18,247,518
effective HSP length: 111
effective length of query: 711
effective length of database: 14,044,392
effective search space: 9985562712
effective search space used: 9985562712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.