TCEB3C 6054

Name: TCEB3C	Sequence: fasta or formatted (546aa)		NCBI GI: 156938279
Description: transcription elongation factor B polypeptide 3C		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 65 2 C cysteine 0.9 5 1 D aspartate 4.4 24 1 E glutamate 7.3 40 2 F phenylalanine 1.6 9 1 G glycine 7.9 43 3 H histidine 2.6 14 1 I isoleucine 1.1 6 1 K lysine 6.0 33 2 L leucine 7.0 38 2 M methionine 1.8 10 1 N asparagine 2.2 12 2 P proline 10.1 55 2 Q glutamine 6.0 33 2 R arginine 9.9 54 2 S serine 7.7 42 2 T threonine 4.4 24 2 V valine 4.4 24 2 W tryptophan 1.3 7 1 Y tyrosine 1.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription elongation factor B polypeptide 3C [H... TCEB3CL 0.996 transcription elongation factor B polypeptide 3C-li... TCEB3B 0.426 elongin A2 TCEB3 0.238 elongin A LOC100293394 0.121 PREDICTED: similar to RNA polymerase II transcripti... TBKBP1 0.024 TBK1 binding protein 1 PRB1 0.023 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.021 proline-rich protein BstNI subfamily 2 ANKRD33B 0.020 PREDICTED: ankyrin repeat domain 33B ABL1 0.018 c-abl oncogene 1, receptor tyrosine kinase isoform a... ABL1 0.018 c-abl oncogene 1, receptor tyrosine kinase isoform b... BPTF 0.018 bromodomain PHD finger transcription factor isoform ... DACT3 0.018 thymus expressed gene 3-like JPH2 0.018 junctophilin 2 isoform 1 KNDC1 0.018 kinase non-catalytic C-lobe domain (KIND) containin... TMPRSS13 0.018 transmembrane protease, serine 13 FLJ37078 0.017 hypothetical protein LOC222183 SRRM1 0.017 serine/arginine repetitive matrix 1 UBN2 0.017 ubinuclein 2 MNT 0.017 MAX binding protein LOC100131455 0.017 PREDICTED: hypothetical protein LOC100131455 0.017 PREDICTED: hypothetical protein LOC440829 0.017 PREDICTED: transmembrane protein 46-like DNMT3A 0.017 DNA cytosine methyltransferase 3 alpha isoform c [Ho... RPH3A 0.017 rabphilin 3A homolog isoform 1 RPH3A 0.017 rabphilin 3A homolog isoform 2 ANKRD56 0.017 ankyrin repeat domain 56 SYNJ1 0.017 synaptojanin 1 isoform a CPSF6 0.017 cleavage and polyadenylation specific factor 6, 68 ... C6orf174 0.017 hypothetical protein LOC387104 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.