LOC100293394 23048

Name: LOC100293394	Sequence: fasta or formatted (78aa)		NCBI GI: 239757016
Description: PREDICTED: similar to RNA polymerase II transcription factor SIII subunit A3, partial		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.9 14 2 C cysteine 0.0 0 0 D aspartate 6.4 5 1 E glutamate 2.6 2 1 F phenylalanine 1.3 1 1 G glycine 17.9 14 3 H histidine 1.3 1 1 I isoleucine 1.3 1 1 K lysine 9.0 7 2 L leucine 2.6 2 1 M methionine 2.6 2 1 N asparagine 2.6 2 1 P proline 9.0 7 1 Q glutamine 2.6 2 1 R arginine 7.7 6 2 S serine 11.5 9 2 T threonine 1.3 1 1 V valine 1.3 1 1 W tryptophan 0.0 0 0 Y tyrosine 1.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to RNA polymerase II transcripti... TCEB3CL 0.970 transcription elongation factor B polypeptide 3C-li... TCEB3C 0.970 transcription elongation factor B polypeptide 3C [H... TCEB3B 0.563 elongin A2 TCEB3 0.207 elongin A LOC339192 0.081 PREDICTED: hypothetical protein LOC339192 0.081 PREDICTED: hypothetical protein LOC339192 0.081 PREDICTED: hypothetical protein KIF26B 0.081 kinesin family member 26B LOC100288548 0.074 PREDICTED: hypothetical protein XP_002342129 TTC15 0.074 tetratricopeptide repeat domain 15 SOX11 0.074 SRY-box 11 OTUD5 0.074 OTU domain containing 5 isoform a OTUD5 0.074 OTU domain containing 5 isoform b OTUD5 0.074 OTU domain containing 5 isoform b BSN 0.067 bassoon protein PURA 0.059 purine-rich element binding protein A CITED2 0.059 Cbp/p300-interacting transactivator, with Glu/Asp-ri... JUNB 0.059 jun B proto-oncogene BHLHE22 0.059 basic helix-loop-helix domain containing, class B, 5... MNX1 0.059 homeo box HB9 ZSWIM6 0.059 zinc finger, SWIM-type containing 6 FOXQ1 0.059 forkhead box Q1 BPTF 0.059 bromodomain PHD finger transcription factor isoform ... BPTF 0.059 bromodomain PHD finger transcription factor isoform ... MAP6 0.059 microtubule-associated protein 6 isoform 2 MAP6 0.059 microtubule-associated protein 6 isoform 1 RALY 0.059 RNA binding protein (autoantigenic, hnRNP-associated ... RALY 0.059 RNA binding protein (autoantigenic, hnRNP-associated... TWIST1 0.052 twist Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.