Guide to the Human Genome
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Name: FYB Sequence: fasta or formatted (829aa) NCBI GI: 42476118
Description:

FYN binding protein (FYB-120/130) isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {783aa} FYN binding protein (FYB-120/130) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         38           2
 C cysteine            0.5          4           2
 D aspartate           7.5         62           3
 E glutamate           8.2         68           3
 F phenylalanine       2.9         24           1
 G glycine             8.0         66           2
 H histidine           1.2         10           1
 I isoleucine          3.5         29           2
 K lysine             12.2        101           3
 L leucine             5.9         49           1
 M methionine          0.7          6           1
 N asparagine          4.3         36           2
 P proline            11.6         96           5
 Q glutamine           4.0         33           1
 R arginine            3.1         26           1
 S serine              9.7         80           3
 T threonine           5.2         43           2
 V valine              4.3         36           2
 W tryptophan          0.7          6           1
 Y tyrosine            1.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FYN binding protein (FYB-120/130) isoform 1 
FYB                   0.932   FYN binding protein (FYB-120/130) isoform 2 
C1orf168              0.070   hypothetical protein LOC199920 
PRAM1                 0.041   PML-RARA regulated adaptor molecule 1 
PRB2                  0.031   proline-rich protein BstNI subfamily 2 
NACA                  0.030   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
PELP1                 0.027   proline, glutamic acid and leucine rich protein 1 [...
SETD1B                0.026   SET domain containing 1B 
ATN1                  0.026   atrophin-1 
ATN1                  0.026   atrophin-1 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 
COL5A1                0.023   alpha 1 type V collagen preproprotein 
FLJ22184              0.022   PREDICTED: hypothetical protein LOC80164 
PCLO                  0.022   piccolo isoform 2 
PCLO                  0.022   piccolo isoform 1 
PRR12                 0.021   proline rich 12 
PRB1                  0.021   proline-rich protein BstNI subfamily 1 isoform 1 pre...
BAT2                  0.021   HLA-B associated transcript-2 
CHAF1A                0.021   chromatin assembly factor 1, subunit A (p150) 
MAST4                 0.021   microtubule associated serine/threonine kinase fami...
ZNF828                0.020   zinc finger protein 828 
RERE                  0.020   atrophin-1 like protein isoform b 
RERE                  0.020   atrophin-1 like protein isoform a 
RERE                  0.020   atrophin-1 like protein isoform a 
ZC3H4                 0.019   zinc finger CCCH-type containing 4 
CHD7                  0.019   chromodomain helicase DNA binding protein 7 
SRRM1                 0.019   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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