Guide to the Human Genome
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Name: MEX3A Sequence: fasta or formatted (520aa) NCBI GI: 147902746
Description:

MEX3A protein

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         60           2
 C cysteine            3.1         16           1
 D aspartate           3.3         17           1
 E glutamate           6.7         35           2
 F phenylalanine       3.1         16           1
 G glycine            12.3         64           7
 H histidine           1.3          7           1
 I isoleucine          4.2         22           2
 K lysine              3.3         17           1
 L leucine             6.3         33           2
 M methionine          1.2          6           1
 N asparagine          2.3         12           2
 P proline            10.2         53           5
 Q glutamine           3.5         18           3
 R arginine            6.7         35           2
 S serine              6.7         35           7
 T threonine           5.6         29           2
 V valine              6.2         32           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MEX3A protein 
MEX3C                 0.356   ring finger and KH domain containing 2 
MEX3B                 0.351   mex-3 homolog B 
MEX3D                 0.345   ring finger and KH domain containing 1 
RANBP9                0.028   RAN binding protein 9 
FMNL2                 0.028   formin-like 2 
NEURL1B               0.027   neuralized homolog 1B 
VASP                  0.026   vasodilator-stimulated phosphoprotein 
LMTK3                 0.025   lemur tyrosine kinase 3 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.024   PREDICTED: hypothetical protein LOC80164 
DSCAML1               0.024   Down syndrome cell adhesion molecule like 1 
LOC100131102          0.023   PREDICTED: hypothetical protein 
HCN2                  0.022   hyperpolarization activated cyclic nucleotide-gated...
CEL                   0.022   carboxyl ester lipase precursor 
FUBP1                 0.022   far upstream element-binding protein 
SAMD1                 0.022   sterile alpha motif domain containing 1 
PRR12                 0.022   proline rich 12 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
PCLO                  0.021   piccolo isoform 2 
PCLO                  0.021   piccolo isoform 1 
HDLBP                 0.021   high density lipoprotein binding protein 
HDLBP                 0.021   high density lipoprotein binding protein 
MARCH11               0.021   membrane-associated ring finger (C3HC4) 11 
ACR                   0.021   acrosin precursor 
MANEAL                0.021   mannosidase, endo-alpha-like isoform 3 
MANEAL                0.021   mannosidase, endo-alpha-like isoform 1 
ASXL3                 0.021   additional sex combs like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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