Guide to the Human Genome
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Name: ZNF598 Sequence: fasta or formatted (904aa) NCBI GI: 30039694
Description:

zinc finger protein 598

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         93           6
 C cysteine            3.5         32           2
 D aspartate           4.3         39           3
 E glutamate           7.1         64           4
 F phenylalanine       3.7         33           1
 G glycine             7.9         71           3
 H histidine           3.0         27           1
 I isoleucine          1.7         15           2
 K lysine              4.9         44           4
 L leucine             7.9         71           2
 M methionine          0.6          5           1
 N asparagine          1.3         12           1
 P proline            10.5         95           6
 Q glutamine           5.4         49           3
 R arginine            8.3         75           2
 S serine              7.9         71           5
 T threonine           4.8         43           5
 V valine              4.3         39           3
 W tryptophan          0.4          4           1
 Y tyrosine            2.4         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 598 
LOC645937             0.147   PREDICTED: similar to zinc finger protein 598 [Homo...
LOC645937             0.131   PREDICTED: similar to zinc finger protein 598 [Homo...
LOC645937             0.131   PREDICTED: similar to zinc finger protein 598 [Homo...
NACA                  0.035   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.033   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.030   PREDICTED: hypothetical protein LOC80164 
PRB2                  0.029   proline-rich protein BstNI subfamily 2 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
NCOR2                 0.024   nuclear receptor co-repressor 2 isoform 1 
WBP11                 0.024   WW domain binding protein 11 
COL17A1               0.023   alpha 1 type XVII collagen 
COL8A1                0.023   alpha 1 type VIII collagen precursor 
COL8A1                0.023   alpha 1 type VIII collagen precursor 
COL27A1               0.023   collagen, type XXVII, alpha 1 
PRB1                  0.023   proline-rich protein BstNI subfamily 1 isoform 1 pre...
COL1A1                0.023   alpha 1 type I collagen preproprotein 
TAF4                  0.023   TBP-associated factor 4 
ANO8                  0.022   anoctamin 8 
MUC2                  0.022   mucin 2 precursor 
LOC100134663          0.022   PREDICTED: hypothetical protein, partial 
WASF2                 0.022   WAS protein family, member 2 
SETD1B                0.022   SET domain containing 1B 
SRCAP                 0.022   Snf2-related CBP activator protein 
COL5A1                0.022   alpha 1 type V collagen preproprotein 
FMN2                  0.022   formin 2 
WIPF1                 0.022   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.022   WAS/WASL interacting protein family, member 1 
COL10A1               0.021   type X collagen alpha 1 precursor 
SFPQ                  0.021   splicing factor proline/glutamine rich (polypyrimidin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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