Guide to the Human Genome
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Name: FAM169A Sequence: fasta or formatted (670aa) NCBI GI: 153792633
Description:

hypothetical protein LOC26049

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         36           1
 C cysteine            0.9          6           1
 D aspartate           6.4         43           2
 E glutamate          12.8         86           3
 F phenylalanine       3.3         22           1
 G glycine             5.1         34           2
 H histidine           1.5         10           1
 I isoleucine          3.6         24           2
 K lysine              6.1         41           3
 L leucine             9.3         62           2
 M methionine          2.2         15           1
 N asparagine          3.3         22           1
 P proline             5.8         39           2
 Q glutamine           4.8         32           2
 R arginine            4.2         28           2
 S serine             11.8         79           3
 T threonine           5.4         36           2
 V valine              5.1         34           2
 W tryptophan          0.7          5           2
 Y tyrosine            2.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC26049 
FAM169B               0.059   hypothetical protein LOC283777 
NEFM                  0.027   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.027   neurofilament, medium polypeptide 150kDa isoform 2 ...
DMP1                  0.025   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.025   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
DSPP                  0.022   dentin sialophosphoprotein preproprotein 
MYST3                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
SRCAP                 0.021   Snf2-related CBP activator protein 
SMTNL1                0.021   smoothelin-like 1 
AKAP12                0.020   A kinase (PRKA) anchor protein 12 isoform 1 
PELP1                 0.019   proline, glutamic acid and leucine rich protein 1 [...
AKAP12                0.019   A kinase (PRKA) anchor protein 12 isoform 2 
L1TD1                 0.019   LINE-1 type transposase domain containing 1 
RP1L1                 0.019   retinitis pigmentosa 1-like 1 
EIF5B                 0.019   eukaryotic translation initiation factor 5B 
BRD4                  0.018   bromodomain-containing protein 4 isoform long 
YTHDC1                0.018   splicing factor YT521-B isoform 2 
YTHDC1                0.018   splicing factor YT521-B isoform 1 
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
ATF7IP                0.017   activating transcription factor 7 interacting protei...
SAFB                  0.017   scaffold attachment factor B 
CTTNBP2NL             0.016   CTTNBP2 N-terminal like 
MYST4                 0.016   MYST histone acetyltransferase (monocytic leukemia)...
SPARCL1               0.016   SPARC-like 1 
SPARCL1               0.016   SPARC-like 1 
HTATSF1               0.015   HIV-1 Tat specific factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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