Guide to the Human Genome
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Name: CTTNBP2NL Sequence: fasta or formatted (639aa) NCBI GI: 24308179
Description:

CTTNBP2 N-terminal like

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         45           3
 C cysteine            1.3          8           1
 D aspartate           3.1         20           2
 E glutamate           9.7         62           3
 F phenylalanine       1.9         12           1
 G glycine             4.5         29           2
 H histidine           1.9         12           1
 I isoleucine          2.7         17           1
 K lysine              8.1         52           2
 L leucine            10.2         65           3
 M methionine          1.9         12           1
 N asparagine          4.1         26           2
 P proline             7.7         49           3
 Q glutamine           6.1         39           2
 R arginine            5.2         33           1
 S serine             11.9         76           3
 T threonine           7.0         45           2
 V valine              4.5         29           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CTTNBP2 N-terminal like 
CTTNBP2               0.293   cortactin binding protein 2 
FILIP1                0.103   filamin A interacting protein 1 
FILIP1L               0.098   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.098   filamin A interacting protein 1-like isoform 1 [Hom...
FILIP1L               0.042   filamin A interacting protein 1-like isoform 2 [Hom...
MYH9                  0.037   myosin, heavy polypeptide 9, non-muscle 
EPS15                 0.036   epidermal growth factor receptor pathway substrate 15...
AKAP9                 0.033   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.033   A-kinase anchor protein 9 isoform 3 
NUMA1                 0.033   nuclear mitotic apparatus protein 1 
MYH11                 0.032   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.032   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.032   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.032   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
FBF1                  0.032   Fas (TNFRSF6) binding factor 1 
EPS15                 0.030   epidermal growth factor receptor pathway substrate ...
INCENP                0.030   inner centromere protein antigens 135/155kDa isofor...
PCNT                  0.029   pericentrin 
SYCP1                 0.029   synaptonemal complex protein 1 
TCHH                  0.029   trichohyalin 
INCENP                0.029   inner centromere protein antigens 135/155kDa isofor...
MYH8                  0.029   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH4                  0.029   myosin, heavy polypeptide 4, skeletal muscle 
NIN                   0.029   ninein isoform 4 
NIN                   0.029   ninein isoform 5 
NIN                   0.029   ninein isoform 1 
NIN                   0.029   ninein isoform 2 
MYH3                  0.028   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH10                 0.028   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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