Guide to the Human Genome
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Name: FAM169B Sequence: fasta or formatted (192aa) NCBI GI: 110624768
Description:

hypothetical protein LOC283777

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         13           2
 C cysteine            3.1          6           1
 D aspartate           7.8         15           4
 E glutamate           7.8         15           3
 F phenylalanine       5.2         10           2
 G glycine             9.9         19           1
 H histidine           2.6          5           1
 I isoleucine          2.6          5           2
 K lysine              4.7          9           1
 L leucine             7.8         15           2
 M methionine          3.6          7           1
 N asparagine          2.1          4           1
 P proline             6.2         12           2
 Q glutamine           3.1          6           1
 R arginine            8.3         16           2
 S serine              5.7         11           2
 T threonine           4.7          9           2
 V valine              5.2         10           2
 W tryptophan          1.0          2           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC283777 
FAM169A               0.204   hypothetical protein LOC26049 
C9orf47               0.026   hypothetical protein LOC286223 isoform 2 
C9orf47               0.024   hypothetical protein LOC286223 isoform 1 
LOC100127891          0.019   PREDICTED: hypothetical protein 
INCENP                0.013   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.013   inner centromere protein antigens 135/155kDa isofor...
TUBGCP6               0.013   tubulin, gamma complex associated protein 6 
PRPF40B               0.013   Huntingtin interacting protein C isoform 2 
PRPF40B               0.013   Huntingtin interacting protein C isoform 1 
ERICH1                0.013   glutamate-rich 1 
RBM20                 0.011   RNA binding motif protein 20 
TFPT                  0.011   TCF3 (E2A) fusion partner 
OGFRL1                0.011   opioid growth factor receptor-like 1 
ADRA2B                0.008   alpha-2B-adrenergic receptor 
ARHGEF19              0.008   Rho guanine nucleotide exchange factor (GEF) 19 [Hom...
GTF3C5                0.008   general transcription factor IIIC, polypeptide 5 is...
GTF3C5                0.008   general transcription factor IIIC, polypeptide 5 is...
CUBN                  0.008   cubilin 
ARID3A                0.008   AT rich interactive domain 3A (BRIGHT- like) protein ...
IRX2                  0.008   iroquois homeobox 2 
IRX2                  0.008   iroquois homeobox 2 
LOC100291544          0.008   PREDICTED: hypothetical protein XP_002347761 
TRIM16                0.008   tripartite motif-containing 16 
KIAA0182              0.008   genetic suppressor element 1 isoform 2 
KIAA0182              0.008   genetic suppressor element 1 isoform 1 
ADAM28                0.005   ADAM metallopeptidase domain 28 isoform 3 preproprot...
ADAM28                0.005   ADAM metallopeptidase domain 28 isoform 1 preproprot...
UBR4                  0.005   retinoblastoma-associated factor 600 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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