Guide to the Human Genome
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Name: NTRK1 Sequence: fasta or formatted (790aa) NCBI GI: 59889558
Description:

neurotrophic tyrosine kinase, receptor, type 1 isoform 1

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [796aa] neurotrophic tyrosine kinase, receptor, type 1 isoform 2
alt prot [760aa] neurotrophic tyrosine kinase, receptor, type 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         63           2
 C cysteine            2.7         21           2
 D aspartate           4.1         32           2
 E glutamate           6.1         48           3
 F phenylalanine       4.1         32           2
 G glycine             9.1         72           2
 H histidine           3.5         28           2
 I isoleucine          2.9         23           2
 K lysine              2.8         22           2
 L leucine            12.9        102           3
 M methionine          2.2         17           1
 N asparagine          4.1         32           2
 P proline             5.8         46           2
 Q glutamine           4.7         37           2
 R arginine            5.8         46           2
 S serine              6.3         50           2
 T threonine           4.2         33           2
 V valine              7.2         57           2
 W tryptophan          2.0         16           1
 Y tyrosine            1.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurotrophic tyrosine kinase, receptor, type 1 isofo... 
NTRK1                 0.996   neurotrophic tyrosine kinase, receptor, type 1 isofor...
NTRK1                 0.904   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK3                 0.452   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.445   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK2                 0.434   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.428   neurotrophic tyrosine kinase, receptor, type 2 isofo...
MUSK                  0.163   skeletal muscle receptor tyrosine kinase 
NTRK3                 0.159   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK2                 0.145   neurotrophic tyrosine kinase, receptor, type 2 isofo...
ROR1                  0.141   receptor tyrosine kinase-like orphan receptor 1 iso...
NTRK2                 0.139   neurotrophic tyrosine kinase, receptor, type 2 isofo...
IGF1R                 0.137   insulin-like growth factor 1 receptor precursor [Homo...
DDR2                  0.137   discoidin domain receptor family, member 2 precursor...
DDR2                  0.137   discoidin domain receptor family, member 2 precursor...
ROR2                  0.133   receptor tyrosine kinase-like orphan receptor 2 prec...
DDR1                  0.133   discoidin domain receptor family, member 1 isoform b...
DDR1                  0.133   discoidin domain receptor family, member 1 isoform a...
INSRR                 0.133   insulin receptor-related receptor precursor 
INSR                  0.133   insulin receptor isoform Short precursor 
INSR                  0.133   insulin receptor isoform Long precursor 
NTRK2                 0.131   neurotrophic tyrosine kinase, receptor, type 2 isofo...
DDR1                  0.129   discoidin domain receptor family, member 1 isoform c...
ALK                   0.128   anaplastic lymphoma kinase 
PTK7                  0.126   PTK7 protein tyrosine kinase 7 isoform b precursor [...
PTK7                  0.126   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.126   PTK7 protein tyrosine kinase 7 isoform c precursor [...
LTK                   0.124   leukocyte receptor tyrosine kinase isoform 1 precurs...
LTK                   0.124   leukocyte receptor tyrosine kinase isoform 2 precurs...
FGFR4                 0.124   fibroblast growth factor receptor 4 isoform 1 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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