Guide to the Human Genome
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Name: NTRK2 Sequence: fasta or formatted (838aa) NCBI GI: 21361306
Description:

neurotrophic tyrosine kinase, receptor, type 2 isoform a precursor

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [477aa] neurotrophic tyrosine kinase, receptor, type 2 isoform b precursor
alt prot [822aa] neurotrophic tyrosine kinase, receptor, type 2 isoform c precursor
alt prot [553aa] neurotrophic tyrosine kinase, receptor, type 2 isoform d precursor
alt prot [537aa] neurotrophic tyrosine kinase, receptor, type 2 isoform e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         48           2
 C cysteine            2.6         22           1
 D aspartate           5.5         46           3
 E glutamate           5.3         44           2
 F phenylalanine       3.9         33           1
 G glycine             6.7         56           2
 H histidine           3.8         32           2
 I isoleucine          6.4         54           2
 K lysine              5.3         44           1
 L leucine             8.9         75           2
 M methionine          2.5         21           1
 N asparagine          6.2         52           2
 P proline             5.4         45           2
 Q glutamine           3.5         29           2
 R arginine            3.7         31           1
 S serine              7.3         61           3
 T threonine           5.5         46           2
 V valine              6.8         57           3
 W tryptophan          2.0         17           1
 Y tyrosine            3.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurotrophic tyrosine kinase, receptor, type 2 isofo... 
NTRK2                 0.974   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.646   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.620   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.554   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK3                 0.485   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.480   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK1                 0.399   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK1                 0.399   neurotrophic tyrosine kinase, receptor, type 1 isofor...
NTRK1                 0.392   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK3                 0.192   neurotrophic tyrosine kinase, receptor, type 3 isofo...
MUSK                  0.154   skeletal muscle receptor tyrosine kinase 
ROR1                  0.133   receptor tyrosine kinase-like orphan receptor 1 iso...
DDR2                  0.133   discoidin domain receptor family, member 2 precursor...
DDR2                  0.133   discoidin domain receptor family, member 2 precursor...
DDR1                  0.129   discoidin domain receptor family, member 1 isoform b...
DDR1                  0.129   discoidin domain receptor family, member 1 isoform a...
ROR2                  0.129   receptor tyrosine kinase-like orphan receptor 2 prec...
IGF1R                 0.128   insulin-like growth factor 1 receptor precursor [Homo...
INSR                  0.128   insulin receptor isoform Short precursor 
INSR                  0.128   insulin receptor isoform Long precursor 
DDR1                  0.126   discoidin domain receptor family, member 1 isoform c...
INSRR                 0.124   insulin receptor-related receptor precursor 
ALK                   0.120   anaplastic lymphoma kinase 
PTK7                  0.116   PTK7 protein tyrosine kinase 7 isoform a precursor [...
FGFR3                 0.114   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.113   fibroblast growth factor receptor 3 isoform 1 precurs...
LTK                   0.112   leukocyte receptor tyrosine kinase isoform 1 precurs...
LTK                   0.112   leukocyte receptor tyrosine kinase isoform 2 precurs...
FGFR2                 0.110   fibroblast growth factor receptor 2 isoform 4 precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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