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Search of human proteins with 150456449
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150456449 hexosaminidase (glycosyl hydrolase family 20,
catalytic domain) containing [Homo sapiens]
(585 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150456449 hexosaminidase (glycosyl hydrolase family 20, catal... 1217 0.0
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 37 0.039
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 37 0.039
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 36 0.11
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 36 0.11
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 36 0.11
gi|239755581 PREDICTED: hypothetical protein [Homo sapiens] 34 0.43
gi|46250735 keratin associated protein 10-2 [Homo sapiens] 33 0.56
gi|38490571 keratin associated protein 10-7 [Homo sapiens] 33 0.56
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 33 0.73
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 33 0.73
gi|41281612 zinc finger protein 828 [Homo sapiens] 33 0.73
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens] 33 0.73
gi|4504373 hexosaminidase B preproprotein [Homo sapiens] 33 0.95
gi|239742514 PREDICTED: similar to Putative POM121-like protein ... 33 0.95
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 33 0.95
gi|11641239 hypothetical protein LOC53838 [Homo sapiens] 33 0.95
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 33 0.95
gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo ... 32 1.2
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens] 32 1.2
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 32 1.2
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 32 1.2
gi|39930610 sodium channel, voltage-gated, type I, beta isoform ... 32 1.6
gi|239751156 PREDICTED: hypothetical protein LOC146429 isoform 6... 32 1.6
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 32 1.6
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 32 1.6
gi|63053515 keratin associated protein 10-3 [Homo sapiens] 32 1.6
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 32 1.6
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 32 2.1
>gi|150456449 hexosaminidase (glycosyl hydrolase family 20,
catalytic domain) containing [Homo sapiens]
Length = 585
Score = 1217 bits (3149), Expect = 0.0
Identities = 585/585 (100%), Positives = 585/585 (100%)
Query: 1 MSGSTPFQMRLVHLDLKGAPPKVSYLSEIFPLFRALGANGLLIEYEDMFPYEGPLRLLRA 60
MSGSTPFQMRLVHLDLKGAPPKVSYLSEIFPLFRALGANGLLIEYEDMFPYEGPLRLLRA
Sbjct: 1 MSGSTPFQMRLVHLDLKGAPPKVSYLSEIFPLFRALGANGLLIEYEDMFPYEGPLRLLRA 60
Query: 61 KYAYSPSEIKEILHLAGLNELEVIPLVQTFGHMEFVLKHTAFAHLREVGSFPCTLNPHEA 120
KYAYSPSEIKEILHLAGLNELEVIPLVQTFGHMEFVLKHTAFAHLREVGSFPCTLNPHEA
Sbjct: 61 KYAYSPSEIKEILHLAGLNELEVIPLVQTFGHMEFVLKHTAFAHLREVGSFPCTLNPHEA 120
Query: 121 ESLALVGAMIDQVLELHPGAQRLHIGCDEVYYLGEGEASRRWLQQEQNSTGKLCLSHMRA 180
ESLALVGAMIDQVLELHPGAQRLHIGCDEVYYLGEGEASRRWLQQEQNSTGKLCLSHMRA
Sbjct: 121 ESLALVGAMIDQVLELHPGAQRLHIGCDEVYYLGEGEASRRWLQQEQNSTGKLCLSHMRA 180
Query: 181 VASGVKARRPSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQK 240
VASGVKARRPSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQK
Sbjct: 181 VASGVKARRPSVTPLVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQK 240
Query: 241 YRRCGFPQLWAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGSGPTDSLQGIILTGWQR 300
YRRCGFPQLWAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGSGPTDSLQGIILTGWQR
Sbjct: 241 YRRCGFPQLWAASAFKGATGPSQAVPPVEHHLRNHVQWLQVAGSGPTDSLQGIILTGWQR 300
Query: 301 YDHYSVLCELLPAGVPSLAACLQLLLRGGFDEDVKAKVENLLGISSLEKTDPVRQAPCSP 360
YDHYSVLCELLPAGVPSLAACLQLLLRGGFDEDVKAKVENLLGISSLEKTDPVRQAPCSP
Sbjct: 301 YDHYSVLCELLPAGVPSLAACLQLLLRGGFDEDVKAKVENLLGISSLEKTDPVRQAPCSP 360
Query: 361 PCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMS 420
PCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMS
Sbjct: 361 PCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMS 420
Query: 421 LAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKT 480
LAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKT
Sbjct: 421 LAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKT 480
Query: 481 CTPACSGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWA 540
CTPACSGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWA
Sbjct: 481 CTPACSGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWA 540
Query: 541 IRAHVGVVPSGPAVSCPHSVPEGPGQPLGERLENTEGSSTGRPAL 585
IRAHVGVVPSGPAVSCPHSVPEGPGQPLGERLENTEGSSTGRPAL
Sbjct: 541 IRAHVGVVPSGPAVSCPHSVPEGPGQPLGERLENTEGSSTGRPAL 585
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 40/144 (27%)
Query: 388 APSLAATSLPL-------SHKSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFS 440
+PS + S+P S ASI +A W A+ + S P+ + +S + SW S
Sbjct: 102 SPSASGASIPSDSGWASPSVSGASIPSAFW-----ASPSASGASTPSDSGWASPSASWAS 156
Query: 441 TSS----PQRSASWHSGAPSCRS-------------WRLP-CSWLSTRMPWRS-----GW 477
TSS SASW S + SC S W P W+S W S GW
Sbjct: 157 TSSDSGWASPSASWTSPSASCASSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGW 216
Query: 478 RKTCTPACSGCKLCCRTSARCLPP 501
TP+ SG +SA C+ P
Sbjct: 217 --ASTPSDSG---WASSSASCISP 235
Score = 35.4 bits (80), Expect = 0.15
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 25/145 (17%)
Query: 379 AGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSW 438
A SA APS + +S P +++++ + W A+ + SAP+ + +S + S
Sbjct: 295 ASSSASWASAPSDSGSSSPSVSRASTLSVSGW-----ASFSASGASAPSDSGWTSHSASG 349
Query: 439 FSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWR------------SGWRKTCTPACS 486
ST+S + W S + S S W S W SGW +P+ S
Sbjct: 350 VSTTS---DSGWASPSASGASTSSDSGWASPSASWASPSASGASTPSDSGW---ASPSAS 403
Query: 487 GCKLCCRTSARCLPPRCHPPALAGT 511
G + ++ P C P A T
Sbjct: 404 GASM--PSAPSLCPGSCFPQLTART 426
Score = 30.0 bits (66), Expect = 6.2
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 420 SLAGSAPTTASG-SSSTRSWFSTSSPQRSASWHSG-APSCRSWRL----------PCSWL 467
S +G++ ++ SG +S + SW STS+ + S S SG A S SW SW
Sbjct: 236 SASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDSGWVCPSASWA 295
Query: 468 STRMPWRS 475
S+ W S
Sbjct: 296 SSSASWAS 303
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 37.4 bits (85), Expect = 0.039
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 405 ICAALWMRCWRATGMSLAGSAPTTASGSS-STRSWFSTSSPQRSASWHSGAPSCRS---- 459
I A+ C G S+P+T +GSS + + RS + PSC +
Sbjct: 12 IAASTMSVCSSDVGHVSRVSSPSTCTGSSWQVDNCQESCCEPRSCASSCCTPSCCAPAPC 71
Query: 460 WRLPCSWLSTR-MPWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
L C+ +S P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 72 LALVCAPVSCEPSPCQSGCTDSCTPSCCQQSSCQPACCTSSPCQQACCVP 121
Score = 30.0 bits (66), Expect = 6.2
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 478 RKTCTPACS-GCKLCCRTSARCLPPRCHPPALAGTLLR 514
R C PAC CC ++ C P CHP + L R
Sbjct: 214 RPVCRPACCVPVPSCCVPASSCQPSCCHPASCLSFLCR 251
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 37.4 bits (85), Expect = 0.039
Identities = 21/71 (29%), Positives = 25/71 (35%)
Query: 418 GMSLAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGW 477
G A +P SW S P + W G P R P + + R RS W
Sbjct: 10 GALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWACGPPHWGPQRGPRNAAAARPGPRSRW 69
Query: 478 RKTCTPACSGC 488
K C AC C
Sbjct: 70 HKRCAAACGAC 80
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 35.8 bits (81), Expect = 0.11
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 350 TDPVRQAPC-------SPPCPLLP-LPFPRPWRQLFSAGLSAGRGPAP-SLAATSLPLSH 400
TDP PC +PP PLLP +P P P S+ S P+P S A PL
Sbjct: 767 TDPSSPPPCPPVLTVATPPPPLLPTVPLPAP-----SSSASPHPCPSPLSNATAQSPLPI 821
Query: 401 KSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAP 455
S ++ + MS A P T S SSS+ S S+ S S+S S P
Sbjct: 822 LSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 876
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 35.8 bits (81), Expect = 0.11
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 350 TDPVRQAPC-------SPPCPLLP-LPFPRPWRQLFSAGLSAGRGPAP-SLAATSLPLSH 400
TDP PC +PP PLLP +P P P S+ S P+P S A PL
Sbjct: 968 TDPSSPPPCPPVLTVATPPPPLLPTVPLPAP-----SSSASPHPCPSPLSNATAQSPLPI 1022
Query: 401 KSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAP 455
S ++ + MS A P T S SSS+ S S+ S S+S S P
Sbjct: 1023 LSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 1077
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 35.8 bits (81), Expect = 0.11
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 350 TDPVRQAPC-------SPPCPLLP-LPFPRPWRQLFSAGLSAGRGPAP-SLAATSLPLSH 400
TDP PC +PP PLLP +P P P S+ S P+P S A PL
Sbjct: 968 TDPSSPPPCPPVLTVATPPPPLLPTVPLPAP-----SSSASPHPCPSPLSNATAQSPLPI 1022
Query: 401 KSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAP 455
S ++ + MS A P T S SSS+ S S+ S S+S S P
Sbjct: 1023 LSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 1077
>gi|239755581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 33.9 bits (76), Expect = 0.43
Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 440 STSSPQRSASWH-SGAPSCRSWRLPCSWLSTRMPWRSGWRKTCTPACSGCKLCCRTSARC 498
S + P R A+ S AP R P + +T + + R+ C C+ +LC R C
Sbjct: 21 SAAGPSRGAAHSPSSAPHASRHRPPFNSRATGLLQQ---RQHCVHHCT--QLCPRVQTPC 75
Query: 499 LPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWAIRAHVGVVPSGPAVSCPH 558
LPP PPA A T L + + RGLL G Q W H G + C
Sbjct: 76 LPP---PPAPA-TELHSYLQQGGERGLLDTTPG--ESQGCW----HSHTTLLGQQLPCQQ 125
Query: 559 SVPEGPGQ 566
V + PGQ
Sbjct: 126 PVLQQPGQ 133
>gi|46250735 keratin associated protein 10-2 [Homo sapiens]
Length = 255
Score = 33.5 bits (75), Expect = 0.56
Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 20/93 (21%)
Query: 432 SSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWL----------------STRMPWRS 475
S+ T SW P+ G PSC + PC L +S
Sbjct: 11 SACTNSWQVDDCPESCCELPCGTPSCCA-PAPCLTLVCTPVSCVSSPCCQAACEPSACQS 69
Query: 476 GWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
G +CTP+C S C+ C TS+ C C P
Sbjct: 70 GCTSSCTPSCCQQSSCQPACCTSSPCQQACCVP 102
>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
Length = 370
Score = 33.5 bits (75), Expect = 0.56
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 464 CSWLSTRMPWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
C + P +SG +CTP+C S CK C TS+ C C P
Sbjct: 187 CQAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSPCQQACCVP 231
Score = 32.7 bits (73), Expect = 0.95
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 472 PWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+L C S+ C C P
Sbjct: 76 PCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVP 112
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 33.1 bits (74), Expect = 0.73
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 352 PVRQAPCSPPCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAAT---SLPLS--------H 400
P Q P PP P P+ P L SA L+ G P P LA T SLP S
Sbjct: 391 PASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQP-PPLAVTVPSSLPQSPPENPGQPS 449
Query: 401 KSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSAS 449
I +A ++ +R + S A +PT+ S + + SSPQ +++
Sbjct: 450 MGIDIASAPALQQYRTSAGSPANQSPTS---PVSNQGFSPGSSPQHTST 495
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 33.1 bits (74), Expect = 0.73
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 352 PVRQAPCSPPCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAAT---SLPLS--------H 400
P Q P PP P P+ P L SA L+ G P P LA T SLP S
Sbjct: 375 PASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQP-PPLAVTVPSSLPQSPPENPGQPS 433
Query: 401 KSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSAS 449
I +A ++ +R + S A +PT+ S + + SSPQ +++
Sbjct: 434 MGIDIASAPALQQYRTSAGSPANQSPTS---PVSNQGFSPGSSPQHTST 479
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 33.1 bits (74), Expect = 0.73
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 26/148 (17%)
Query: 343 GISSLEKTDPVRQAPCSPPCPLLPLPF--PRPWRQLFSAGLSAGRGPAPSLAATSLPLSH 400
G S + + A + P P P P P PW+ F A R PAP+++ S
Sbjct: 258 GPSPAASPESRKSARTTSPEPRKPSPSESPEPWKP-FPAVSPEPRRPAPAVSPGSWKPGP 316
Query: 401 KSASICAALWMRCWRATGMSLAGS------APTTASG------SSSTRSWFSTSSPQRSA 448
+ R W++ + +G AP+ + G S S W T S SA
Sbjct: 317 PGSP-------RPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVS-SA 368
Query: 449 SWHSGAPSCRSWRLPCSWLSTRMPWRSG 476
SW S + S SW+ P ++ W+SG
Sbjct: 369 SWKSSSVSPSSWKSP---PASPESWKSG 393
Score = 31.2 bits (69), Expect = 2.8
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 18/113 (15%)
Query: 351 DPVRQAPCSPPCPLLPLP--FPRPWRQLFSAGLSAGRG--PAPSLAATSL-PLSHKSASI 405
+P R AP P P P PRPW+ SA + PAPS++ P+ S
Sbjct: 299 EPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Query: 406 CAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCR 458
W+ T + S+ + S S S SW S P SW SG P R
Sbjct: 359 --------WKPTP---SVSSASWKSSSVSPSSW--KSPPASPESWKSGPPELR 398
>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
Length = 398
Score = 33.1 bits (74), Expect = 0.73
Identities = 45/176 (25%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 372 PWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTASG 431
PW+ +FS G P S AAT S AA M G+ +P +G
Sbjct: 49 PWK-VFSGG-----PPVRSQAATGPDFSFLPGLSAAAHTM------GLQWQPQSPRPGAG 96
Query: 432 SSSTRSWFSTSSPQRSASWHSGAPS---CRSWRLPCSWLSTRMPWRSGWRKTCTPAC--- 485
+ ST P S + P+ CRS P + R PWR G K TP
Sbjct: 97 LGAA----STVDPSESTGSSTAPPTKRHCRSLSEPEELVRCRSPWRPGSSKVWTPVSKRR 152
Query: 486 --SGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAW 539
SG + S + PR + T TP + + G + + G+ W
Sbjct: 153 CDSGGSATRQGSPGAVLPRSAVWSTGPTSPATPRPSSASGGFVDSSEGSAGSGPLW 208
>gi|4504373 hexosaminidase B preproprotein [Homo sapiens]
Length = 556
Score = 32.7 bits (73), Expect = 0.95
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 62 YAYSPSEIKEILHLAGLNELEVIPLVQTFGHM------EFVLKHTAFAHLREVGSFPCTL 115
+ Y+P++++ ++ A L + V+P T GH + L ++ ++ SF +
Sbjct: 264 HVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTPCYSRQNKLDSFG-PI 322
Query: 116 NPHEAESLALVGAMIDQVLELHPGAQRLHIGCDEVYY 152
NP + + + ++ E+ P Q +H+G DEV +
Sbjct: 323 NPTLNTTYSFLTTFFKEISEVFPD-QFIHLGGDEVEF 358
>gi|239742514 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 896
Score = 32.7 bits (73), Expect = 0.95
Identities = 52/201 (25%), Positives = 69/201 (34%), Gaps = 21/201 (10%)
Query: 371 RPWRQLFSAGLSAGRGPAPSLAAT-----SLPLSHKSASICAALWMRCWRATGMSLAGSA 425
RP L S A RGP S A T P S + A L A+ L +A
Sbjct: 488 RPSHTLSSLATGASRGPPVSKAPTMDAQQDRPKSQDCLGLLAPL------ASAAELPSTA 541
Query: 426 PTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKTCTPAC 485
P + FS+S P + S HS + + +P + T +G R+T P
Sbjct: 542 PVSGKKHRPPGPLFSSSDPLPATSSHSRDSAQVTSMIPAPF--TAASRDAGMRRT-RPGT 598
Query: 486 SGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWAIRAHV 545
S +A PP P L EG +H A A Q+ + R+
Sbjct: 599 S----APAAAAAAPPPSTLNPTSGSLLNAVDEGPSHFLASATAAARARRSQVRYNQRSQT 654
Query: 546 GVVPS---GPAVSCPHSVPEG 563
S A S HS EG
Sbjct: 655 SRTRSCLKRNASSSSHSSTEG 675
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 32.7 bits (73), Expect = 0.95
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 472 PWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+L C S+ C C P
Sbjct: 76 PCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVP 112
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 464 CSWLSTRMPWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
C + P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 187 CQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVP 231
>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
Length = 449
Score = 32.7 bits (73), Expect = 0.95
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 390 SLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSAS 449
S+A T++ S +ASI A A+ M++A SAPTTA+ S++ S T++ S +
Sbjct: 104 SIAPTAVASSTTAASITTA-------ASSMTVASSAPTTAASSTTVASIAPTTAAS-SMT 155
Query: 450 WHSGAPSCRSWRLPCSWLSTRMP 472
S P + P S + R P
Sbjct: 156 AASSTPMTLALPAPTSTSTGRTP 178
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 32.7 bits (73), Expect = 0.95
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 472 PWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+L C S+ C C P
Sbjct: 76 PCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVP 112
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 464 CSWLSTRMPWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
C + P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 187 CQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCVP 231
>gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo
sapiens]
Length = 485
Score = 32.3 bits (72), Expect = 1.2
Identities = 66/275 (24%), Positives = 86/275 (31%), Gaps = 41/275 (14%)
Query: 281 VAGSGPTDSLQGIILTGWQRYDHYSVLCELLPAGVPSLAACLQLLLRGGFDEDVKAKVEN 340
++ S P Q + L G RY LC LP + E + A +
Sbjct: 212 ISSSSPGPPSQALQLGG-DRYHRAPSLCTALPKAMRRPEKT---------GEGIPATTRS 261
Query: 341 LLGISSLEKTDPVRQAPCSPPCPLLPLPFPRPWRQLFSAGL-SAGRGPAPSLAATSLPLS 399
G S + + R C P P F AGL SA R P S
Sbjct: 262 APGSRSARRREDPRAPGAHRACSSCPRDSPSTLCSAFGAGLVSASRAWDPPSC------S 315
Query: 400 HKSASICAALWMRCWRATGMSLAGSAPTTASGSS----STRSWFSTSSPQRSASWHSGAP 455
H++ LW R + SGSS S W S R HS
Sbjct: 316 HENH-----LWGRACHQWDPGPRHFHRSLRSGSSEKHHSHLRWRRQSCRGRGLLRHS--- 367
Query: 456 SCRSWRLPCSWLSTRMPWRSGWRKTCTPACSGCKLCCRTSARCLPPRCHPPALAGTLL-- 513
CR R WL+ R P GW + PA +L LP P + L
Sbjct: 368 -CRGGR---GWLADRRPAAPGWPRAPGPAYGHTELDSAQHVELLPSLQGPGLTEVSQLGM 423
Query: 514 ----RTPEGRAHARGLLLEAGGALHCQMA--WAIR 542
+ P+ + + GGA+H A W R
Sbjct: 424 ELVPQRPKDQTQLLKGTIAEGGAIHVTSASGWGSR 458
>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
Length = 1302
Score = 32.3 bits (72), Expect = 1.2
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 366 PLPFPRPWRQLFSAG--LSAGRGPAPSLAATSLPLS-HKSASICAA------------LW 410
P P P W + G L++ A LA S PLS H +AS AA
Sbjct: 276 PAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTV 335
Query: 411 MRCWRATGMSLAGSAPTTASGSSSTRSWFSTSSPQRSAS 449
W ++G+S+ S+P+ + +SS ++ ++SS QR +S
Sbjct: 336 THPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSS 374
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 32.3 bits (72), Expect = 1.2
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 21/104 (20%)
Query: 421 LAGSAPTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTR---------- 470
+A S + S + S SW + P+ H A SC + PC L
Sbjct: 1 MAASTMSVCSSACSD-SWQVDACPESCCEPHCCALSCCA-PAPCLTLVCTPVSRVSSPCC 58
Query: 471 ------MPWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 59 QAACEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVP 102
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 32.3 bits (72), Expect = 1.2
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 449 SWHSGAPSCRSWRL---PCSWLSTRMPWRSGWRK--TCTPACSGCKLCCRTSARCLPPRC 503
S +GAPS S RL PC + R P R+ R+ +C+PA + LCC +R
Sbjct: 29 SGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRRRSCSPAPTWPPLCCYPQSRPTASAA 88
Query: 504 HPPALAGTLLRTPEGRAH 521
P G +R GR H
Sbjct: 89 GP----GACMRA-SGRPH 101
>gi|39930610 sodium channel, voltage-gated, type I, beta isoform b
[Homo sapiens]
Length = 268
Score = 32.0 bits (71), Expect = 1.6
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 13/63 (20%)
Query: 444 PQRSASWHSGAPSCRSWRLPCSWLSTR----MPW---RSGWRKTCTPACSGCKLCCRTSA 496
PQ+ A +PSC P S R MP RSG+R C LCC TS
Sbjct: 188 PQQRAEGEGSSPSCPLQLWPLFLSSPRRGQSMPVPHRRSGYRTQL------CHLCCMTSG 241
Query: 497 RCL 499
RCL
Sbjct: 242 RCL 244
>gi|239751156 PREDICTED: hypothetical protein LOC146429 isoform 6
[Homo sapiens]
Length = 560
Score = 32.0 bits (71), Expect = 1.6
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 15/123 (12%)
Query: 366 PLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSA 425
P P RP L L A RGPA AA ++AS C L + +S + A
Sbjct: 46 PAPHCRPDPTLLPPALRALRGPALLDAAIPRLGPTRAASPCLPLGV-------LSPSYLA 98
Query: 426 PTTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKTCTPAC 485
P T + S SW S S +W+ W++P +S + GW C
Sbjct: 99 PLTRAPRPS--SWASCSGAAAGPTWNLVCGD--GWKVPLEQVSHLL----GWLLGCVILG 150
Query: 486 SGC 488
+GC
Sbjct: 151 AGC 153
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 32.0 bits (71), Expect = 1.6
Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 21/133 (15%)
Query: 348 EKTDPVRQAPCSPPCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICA 407
EK+ V + +PP P PLP S G S + +P A L K AS+ +
Sbjct: 437 EKSPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTS 496
Query: 408 ALWMRCWRATG---------------------MSLAGSAPTTASGSSSTRSWFSTSSPQR 446
+ G +S S PTT++ SS S TS+
Sbjct: 497 KIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASE 556
Query: 447 SASWHSGAPSCRS 459
S+S S S S
Sbjct: 557 SSSTISSNQSQES 569
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 32.0 bits (71), Expect = 1.6
Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 21/133 (15%)
Query: 348 EKTDPVRQAPCSPPCPLLPLPFPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICA 407
EK+ V + +PP P PLP S G S + +P A L K AS+ +
Sbjct: 437 EKSPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTS 496
Query: 408 ALWMRCWRATG---------------------MSLAGSAPTTASGSSSTRSWFSTSSPQR 446
+ G +S S PTT++ SS S TS+
Sbjct: 497 KIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASE 556
Query: 447 SASWHSGAPSCRS 459
S+S S S S
Sbjct: 557 SSSTISSNQSQES 569
>gi|63053515 keratin associated protein 10-3 [Homo sapiens]
Length = 221
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 472 PWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 66 PCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVP 102
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 472 PWRSGWRKTCTPAC---SGCKLCCRTSARCLPPRCHP 505
P +SG +CTP+C S C+ C TS+ C C P
Sbjct: 71 PCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVP 107
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 31.6 bits (70), Expect = 2.1
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 371 RPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAPTTAS 430
R R S + R S +++S S +S S + + WR + S +G + +S
Sbjct: 1422 RRGRNSRSVSSGSNRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSS 1481
Query: 431 GSSSTRSWFSTSSPQRSASWHSGAPSCR 458
SSS+ S S+SS S+ S +PS R
Sbjct: 1482 SSSSSSSSSSSSSSSSSSRSRSRSPSPR 1509
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,583,610
Number of Sequences: 37866
Number of extensions: 1459941
Number of successful extensions: 5387
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 5213
Number of HSP's gapped (non-prelim): 252
length of query: 585
length of database: 18,247,518
effective HSP length: 108
effective length of query: 477
effective length of database: 14,157,990
effective search space: 6753361230
effective search space used: 6753361230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.