SCN1B 27275

Name: SCN1B	Sequence: fasta or formatted (268aa)		NCBI GI: 39930610
Description: sodium channel, voltage-gated, type I, beta isoform b		Referenced in: Sodium Channels
Other entries for this name: alt prot [218aa] sodium channel, voltage-gated, type I, beta isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 13 2 C cysteine 4.9 13 2 D aspartate 3.0 8 1 E glutamate 7.8 21 2 F phenylalanine 3.7 10 2 G glycine 7.8 21 2 H histidine 2.6 7 1 I isoleucine 3.7 10 3 K lysine 3.0 8 2 L leucine 9.0 24 2 M methionine 1.5 4 1 N asparagine 3.0 8 1 P proline 3.7 10 1 Q glutamine 3.7 10 2 R arginine 9.7 26 2 S serine 7.8 21 2 T threonine 6.0 16 1 V valine 9.0 24 2 W tryptophan 2.6 7 1 Y tyrosine 2.6 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type I, beta isoform ... SCN1B 0.525 sodium channel, voltage-gated, type I, beta isoform a... SCN3B 0.142 voltage-gated sodium channel beta-3 subunit precursor... SCN3B 0.142 voltage-gated sodium channel beta-3 subunit precurso... MPZL1 0.039 myelin protein zero-like 1 isoform b MPZL1 0.039 myelin protein zero-like 1 isoform a MPZ 0.030 myelin protein zero MPZL2 0.022 myelin protein zero-like 2 precursor MPZL2 0.022 myelin protein zero-like 2 precursor MPZL3 0.021 myelin protein zero-like 3 LOC100130348 0.019 PREDICTED: hypothetical protein LOC100130348 ZNF658 0.019 zinc finger protein 658 IGSF11 0.015 immunoglobulin superfamily, member 11 isoform b [Hom... IGSF11 0.015 immunoglobulin superfamily, member 11 isoform a [Hom... SCN2B 0.013 sodium channel, voltage-gated, type II, beta HEXDC 0.013 hexosaminidase (glycosyl hydrolase family 20, catal... L1TD1 0.013 LINE-1 type transposase domain containing 1 SGK493 0.013 protein kinase-like protein SgK493 LRRC24 0.011 leucine rich repeat containing 24 CD160 0.011 CD160 antigen CEACAM1 0.009 carcinoembryonic antigen-related cell adhesion molec... CEACAM1 0.009 carcinoembryonic antigen-related cell adhesion molec... IGSF1 0.009 immunoglobulin superfamily, member 1 isoform 1 [Homo... ZNF782 0.009 zinc finger protein 782 PELI3 0.009 pellino 3 alpha isoform 2 PELI3 0.009 pellino 3 alpha isoform 1 CHL1 0.009 cell adhesion molecule with homology to L1CAM precur... CXADR 0.007 coxsackie virus and adenovirus receptor precursor [Ho... FSTL4 0.007 follistatin-like 4 ZNF37A 0.007 zinc finger protein 37a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.